Bioschemas for lifesciences Community Group - Activity in 2025
No matches.
GitHub
BioSchemas/specifications
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2 issues opened.
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conditionsOfAccess BioSchemas/specifications#716, by @abotzki.
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Publish LabProcess, LabProtocol, and Sample types BioSchemas/specifications#715, by @elichad.
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8 issues received 10 new comments.
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Ease compliance obligations regading the Nagoya Protocol (in the EU) BioSchemas/specifications#713 (3 comments by @gtsueng, @ljgarcia)
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hasStatus of the Gene profile should be clarified BioSchemas/specifications#512 (1 comment by @gtsueng)
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Add clarification note to gender property in BioSample profile BioSchemas/specifications#515 (1 comment by @gtsueng)
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Double check description for Sample and BioSample BioSchemas/specifications#708 (1 comment by @gtsueng)
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Publish LabProcess, LabProtocol, and Sample types BioSchemas/specifications#715 (1 comment by @nsheff)
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BioSchemas/bioschemas.github.io
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4 pull requests opened.
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Add Phil Reed to Training group BioSchemas/bioschemas.github.io#876, by @PhilReedData.
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Update community call BioSchemas/bioschemas.github.io#875, by @ljgarcia.
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Add news item from ELIXIR BioHackathon Europe 2025 project BioSchemas/bioschemas.github.io#874, by @PhilReedData.
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Move LukasWeil from member to lead in LabProtocols group BioSchemas/bioschemas.github.io#873, by @HLWeil.
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5 pull requests merged.
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added definedterm and url in biosamples BioSchemas/bioschemas.github.io#870.
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Add Phil Reed to Training group BioSchemas/bioschemas.github.io#876.
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Add news item from ELIXIR BioHackathon Europe 2025 project BioSchemas/bioschemas.github.io#874.
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Update community call BioSchemas/bioschemas.github.io#875.
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Move LukasWeil from member to lead in LabProtocols group BioSchemas/bioschemas.github.io#873.
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2 pull requests received 2 new comments.
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Display a list of former members on the people page BioSchemas/bioschemas.github.io#772 (1 comment by @ljgarcia)
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added definedterm and url in biosamples BioSchemas/bioschemas.github.io#870 (1 comment by @ljgarcia)
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BioSchemas/LearningPath-sandbox
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1 issue closed.
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Use `itemListElement` again at top level BioSchemas/LearningPath-sandbox#1.
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2 pull requests opened.
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Syllabus: revision from BioHackathon Germany BioSchemas/LearningPath-sandbox#3, by @PhilReedData.
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2 pull requests merged.
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Syllabus: revision from BioHackathon Germany BioSchemas/LearningPath-sandbox#3.
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Syllabus BioSchemas/LearningPath-sandbox#2.
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2 pull requests received 2 new comments.
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Syllabus: revision from BioHackathon Germany BioSchemas/LearningPath-sandbox#3 (1 comment by @albangaignard)
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GitHub
BioSchemas/specifications
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2 issues opened.
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Ease compliance obligations regading the Nagoya Protocol (in the EU) BioSchemas/specifications#713, by @bressco.
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Suggestions for Organization draft profile following ELIXIR BioHackathon BioSchemas/specifications#712, by @PhilReedData.
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2 issues received 2 new comments.
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Ease compliance obligations regading the Nagoya Protocol (in the EU) BioSchemas/specifications#713 (1 comment by @bressco)
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Suggestions for Organization draft profile following ELIXIR BioHackathon BioSchemas/specifications#712 (1 comment by @PhilReedData)
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1 pull request opened.
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fix commas in 1.0-Release examples courseInstance and trainingMaterial BioSchemas/specifications#714, by @Brilator.
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BioSchemas/LearningPath-sandbox
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1 issue opened.
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Use `itemListElement` again at top level BioSchemas/LearningPath-sandbox#1, by @PhilReedData.
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GitHub
BioSchemas/bioschemas.github.io
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2 pull requests opened.
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Update monthly call details BioSchemas/bioschemas.github.io#872, by @ljgarcia.
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Update commcall date BioSchemas/bioschemas.github.io#871, by @ljgarcia.
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2 pull requests merged.
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Update monthly call details BioSchemas/bioschemas.github.io#872.
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Update commcall date BioSchemas/bioschemas.github.io#871.
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1 pull request received 1 new comment.
BioSchemas/specifications
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1 issue opened.
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Report problems with Bioschemas mark-up tutorial and FAIR-Checker BioSchemas/specifications#711, by @PhilReedData.
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1 issue received 2 new comments.
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`LabProcess` missing from machine readable files BioSchemas/specifications#706 (2 comments by @gtsueng, @ljgarcia)
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1 pull request merged.
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Create LICENSE CC-BY-SA BioSchemas/specifications#707.
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GitHub
BioSchemas/bioschemas.github.io
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14 pull requests opened.
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added definedterm and url in biosamples BioSchemas/bioschemas.github.io#870, by @selgebali.
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Updated biosamples BioSchemas/bioschemas.github.io#869, by @selgebali.
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Update 0.3-DRAFT.html BioSchemas/bioschemas.github.io#868, by @nsjuty.
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Biosample updates BioSchemas/bioschemas.github.io#867, by @selgebali.
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Update 0.3-DRAFT.html BioSchemas/bioschemas.github.io#866, by @nsjuty.
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Updated Biosamples BioSchemas/bioschemas.github.io#865, by @selgebali.
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Update 0.3-DRAFT.html BioSchemas/bioschemas.github.io#864, by @nsjuty.
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Update 0.3-DRAFT.html BioSchemas/bioschemas.github.io#863, by @nsjuty.
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Rename 0.2-DRAFT to 0.2-DRAFT.html BioSchemas/bioschemas.github.io#862, by @gtsueng.
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Update 0.3-DRAFT.html BioSchemas/bioschemas.github.io#861, by @gtsueng.
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Nsjuty patch 1 BioSchemas/bioschemas.github.io#860, by @gtsueng.
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Update 0.3-DRAFT.html BioSchemas/bioschemas.github.io#859, by @nsjuty.
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Create 0.2-DRAFT BioSchemas/bioschemas.github.io#858, by @selgebali.
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Create 0.3-DRAFT.html BioSchemas/bioschemas.github.io#857, by @selgebali.
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14 pull requests merged.
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Updated biosamples BioSchemas/bioschemas.github.io#869.
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Update 0.3-DRAFT.html BioSchemas/bioschemas.github.io#868.
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Biosample updates BioSchemas/bioschemas.github.io#867.
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Updated Biosamples BioSchemas/bioschemas.github.io#865.
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Update 0.3-DRAFT.html BioSchemas/bioschemas.github.io#866.
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Update 0.3-DRAFT.html BioSchemas/bioschemas.github.io#864.
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Update 0.3-DRAFT.html BioSchemas/bioschemas.github.io#863.
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Modify next meeting details including notice of the summer break BioSchemas/bioschemas.github.io#854.
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Rename 0.2-DRAFT to 0.2-DRAFT.html BioSchemas/bioschemas.github.io#862.
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Update 0.3-DRAFT.html BioSchemas/bioschemas.github.io#861.
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Nsjuty patch 1 BioSchemas/bioschemas.github.io#860.
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Update 0.3-DRAFT.html BioSchemas/bioschemas.github.io#859.
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Create 0.2-DRAFT BioSchemas/bioschemas.github.io#858.
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Create 0.3-DRAFT.html BioSchemas/bioschemas.github.io#857.
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1 pull request received 1 new comment.
BioSchemas/specifications
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2 issues opened.
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What is the license of Bioschemas specs? BioSchemas/specifications#710, by @ljgarcia.
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Contraining cardinality of 'isBasedOn' BioSchemas/specifications#709, by @M-casado.
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GitHub
BioSchemas/bioschemas.github.io
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3 pull requests opened.
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Add ISMB/ECCB 2025 presentation BioSchemas/bioschemas.github.io#856, by @PhilReedData.
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News item for ISMB/ECCB 2025 BioSchemas/bioschemas.github.io#855, by @PhilReedData.
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Modify next meeting details including notice of the summer break BioSchemas/bioschemas.github.io#854, by @ljgarcia.
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3 pull requests merged.
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Add ISMB/ECCB 2025 presentation BioSchemas/bioschemas.github.io#856.
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News item for ISMB/ECCB 2025 BioSchemas/bioschemas.github.io#855.
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Update howtojoin.html BioSchemas/bioschemas.github.io#853.
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1 pull request received 1 new comment.
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Modify next meeting details including notice of the summer break BioSchemas/bioschemas.github.io#854 (1 comment by @PhilReedData)
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BioSchemas/specifications
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1 issue closed.
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T7a4: Fly-out submenu navigation, and review navigation content. BioSchemas/specifications#697.
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2 issues received 2 new comments.
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T7a4: Fly-out submenu navigation, and review navigation content. BioSchemas/specifications#697 (1 comment by @PhilReedData)
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Double check description for Sample and BioSample BioSchemas/specifications#708 (1 comment by @ljgarcia)
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GitHub
BioSchemas/specifications
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1 issue opened.
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Double check description for Sample and BioSample BioSchemas/specifications#708, by @ljgarcia.
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1 issue closed.
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T7a6: Breadcrumbs. BioSchemas/specifications#695.
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3 issues received 4 new comments.
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Double check description for Sample and BioSample BioSchemas/specifications#708 (2 comments by @gtsueng, @ljgarcia)
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`LabProcess` missing from machine readable files BioSchemas/specifications#706 (1 comment by @ljgarcia)
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T7a4: Fly-out submenu navigation, and review navigation content. BioSchemas/specifications#697 (1 comment by @PhilReedData)
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BioSchemas/bioschemas.github.io
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4 pull requests opened.
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Update howtojoin.html BioSchemas/bioschemas.github.io#853, by @nsjuty.
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T7A4 Add submenu to navbar BioSchemas/bioschemas.github.io#852, by @PhilReedData.
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Update community dates and add Cologne hackathon BioSchemas/bioschemas.github.io#851, by @ljgarcia.
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Add AHM poster and upcoming hackathon news BioSchemas/bioschemas.github.io#850, by @PhilReedData.
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4 pull requests merged.
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T7A4 Add submenu to navbar BioSchemas/bioschemas.github.io#852.
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Update community dates and add Cologne hackathon BioSchemas/bioschemas.github.io#851.
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Update next meeting details BioSchemas/bioschemas.github.io#849.
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Add AHM poster and upcoming hackathon news BioSchemas/bioschemas.github.io#850.
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1 pull request closed.
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Fix link to markup generator http-only on the Software page BioSchemas/bioschemas.github.io#826.
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1 pull request received 2 new comments.
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Fix link to markup generator http-only on the Software page BioSchemas/bioschemas.github.io#826 (2 comments by @ljgarcia, @PhilReedData)
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Participants
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1 participant joined.
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Onn Kei Lee joined.
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GitHub
BioSchemas/bioschemas.github.io
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2 pull requests opened.
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Update next meeting details BioSchemas/bioschemas.github.io#849, by @ljgarcia.
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new call date BioSchemas/bioschemas.github.io#848, by @albangaignard.
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2 pull requests merged.
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T7a6 Breadcrumbs BioSchemas/bioschemas.github.io#845.
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new call date BioSchemas/bioschemas.github.io#848.
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BioSchemas/specifications
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2 issues received 2 new comments.
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`LabProcess` missing from machine readable files BioSchemas/specifications#706 (1 comment by @multimeric)
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bioChemSimilarity property for BioSample contradiction BioSchemas/specifications#705 (1 comment by @sneumann)
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GitHub
BioSchemas/specifications
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1 issue opened.
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`LabProcess` missing from machine readable files BioSchemas/specifications#706, by @multimeric.
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2 issues closed.
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T7a2: Search the site. BioSchemas/specifications#699.
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bioChemSimilarity property for BioSample contradiction BioSchemas/specifications#705.
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10 issues received 19 new comments.
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T9.1 Review available tools for Bioschemas and update tools page on website BioSchemas/specifications#703 (5 comments by @gtsueng, @ljgarcia, @PhilReedData)
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Bug: Property URIs do not resolve / List of properties seems incomplete BioSchemas/specifications#679 (3 comments by @ljgarcia, @multimeric)
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`LabProcess` missing from machine readable files BioSchemas/specifications#706 (2 comments by @gtsueng, @ljgarcia)
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What are the actual canonical URLs of terms in bioschemas? BioSchemas/specifications#653 (2 comments by @multimeric, @ptsefton)
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Add `includedInDataset` property to all profiles BioSchemas/specifications#617 (1 comment by @ljgarcia)
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Add accessibleForFree to TrainingMaterial and Course profiles BioSchemas/specifications#680 (1 comment by @ljgarcia)
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T7a4: Fly-out submenu navigation, and review navigation content. BioSchemas/specifications#697 (1 comment by @PhilReedData)
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1 pull request opened.
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Create LICENSE CC-BY-SA BioSchemas/specifications#707, by @PhilReedData.
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BioSchemas/bioschemas.github.io
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3 pull requests opened.
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fixed unformatted link to minutes in the index.html BioSchemas/bioschemas.github.io#847, by @albangaignard.
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Move Ivan to former Steering Council members list BioSchemas/bioschemas.github.io#846, by @PhilReedData.
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T7a6 Breadcrumbs BioSchemas/bioschemas.github.io#845, by @PhilReedData.
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6 pull requests merged.
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fixed unformatted link to minutes in the index.html BioSchemas/bioschemas.github.io#847.
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Update script and files to include associatedDisease equivalence BioSchemas/bioschemas.github.io#841.
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Add redirection from terms (Bioschemas ns) to types BioSchemas/bioschemas.github.io#842.
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Create property pages BioSchemas/bioschemas.github.io#843.
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Move Ivan to former Steering Council members list BioSchemas/bioschemas.github.io#846.
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t7a2 add search feature (desktop view) BioSchemas/bioschemas.github.io#840.
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2 pull requests received 12 new comments.
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Fix link to markup generator http-only on the Software page BioSchemas/bioschemas.github.io#826 (4 comments by @ljgarcia, @PhilReedData)
GitHub
BioSchemas/specifications
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2 issues opened.
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bioChemSimilarity property for BioSample contradiction BioSchemas/specifications#705, by @NRayya.
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Add "releaseNotes" Property to BioSchemas for Dataset Versioning BioSchemas/specifications#704, by @zaesa.
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2 issues received 4 new comments.
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bioChemSimilarity property for BioSample contradiction BioSchemas/specifications#705 (3 comments by @gtsueng, @NRayya)
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Bug: Property URIs do not resolve / List of properties seems incomplete BioSchemas/specifications#679 (1 comment by @multimeric)
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BioSchemas/bioschemas.github.io
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1 pull request opened.
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Update community meeting dates and news BioSchemas/bioschemas.github.io#844, by @ljgarcia.
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1 pull request merged.
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Update community meeting dates and news BioSchemas/bioschemas.github.io#844.
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2 pull requests received 3 new comments.
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t7a2 add search feature (desktop view) BioSchemas/bioschemas.github.io#840 (2 comments by @ljgarcia, @PhilReedData)
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Participants
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4 participants joined.
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Victor Lu joined.
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Charles Waweru joined.
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Priyanka Ojha joined.
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Onn Kei Lee joined.
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2 participants left.
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Onn Kei Lee left.
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Priyanka Ojha left.
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GitHub
BioSchemas/specifications
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23 issues opened.
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T9.1 Review available tools for Bioschemas and update tools page on website BioSchemas/specifications#703, by @PhilReedData.
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T1.1: Review Google Analytics dashboard BioSchemas/specifications#702, by @PhilReedData.
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T8.1: Produce infographic 'Why use Bioschemas?' BioSchemas/specifications#701, by @PhilReedData.
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T7a1: Show the current page in the menu. BioSchemas/specifications#700, by @PhilReedData.
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T7a2: Search the site. BioSchemas/specifications#699, by @PhilReedData.
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T7a3: Faceted search. BioSchemas/specifications#698, by @PhilReedData.
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T7a4: Fly-out submenu navigation, and review navigation content. BioSchemas/specifications#697, by @PhilReedData.
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T7a5: Make a form for ‘propose new type’ instead of an email address. BioSchemas/specifications#696, by @PhilReedData.
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T7a6: Breadcrumbs. BioSchemas/specifications#695, by @PhilReedData.
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T7b1: Make titles closer match between page titles, heading and menu links. BioSchemas/specifications#694, by @PhilReedData.
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T7b2: Full review of content, URLs, names, language. BioSchemas/specifications#693, by @PhilReedData.
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T7b3: Direct people to the profiles vs types description, make it obvious. BioSchemas/specifications#692, by @PhilReedData.
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T7b4: Simplify the group creation process. BioSchemas/specifications#691, by @PhilReedData.
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T7b5: Harmonise where the menus are; don't bury links to help inside paragraphs - if its the only way to reach it. BioSchemas/specifications#690, by @PhilReedData.
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T7b6: Make desktop view wider to accommodate left side menu. BioSchemas/specifications#689, by @PhilReedData.
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T7c1: Infographic why to use Bioschemas for mortals. BioSchemas/specifications#688, by @PhilReedData.
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T7c2: Visualisation of what is a profile and what is a type. BioSchemas/specifications#687, by @PhilReedData.
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T7c3: Contribution guide for content writers. BioSchemas/specifications#686, by @PhilReedData.
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T7c4: Contribution guide for web developers. BioSchemas/specifications#685, by @PhilReedData.
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T7c5: Give more description on the Properties page. BioSchemas/specifications#684, by @PhilReedData.
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T7d1: Use accessibility tools to thoroughly check site. BioSchemas/specifications#683, by @PhilReedData.
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T7d2: Improve colours of properties links in the Profiles table, eg remove ‘visited’ colour change. BioSchemas/specifications#682, by @PhilReedData.
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T7d3: Add ARIA markup, especially on the Profiles table, so links can be distinguished by screen readers. BioSchemas/specifications#681, by @PhilReedData.
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4 issues closed.
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T7b1: Make titles closer match between page titles, heading and menu links. BioSchemas/specifications#694.
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T7b3: Direct people to the profiles vs types description, make it obvious. BioSchemas/specifications#692.
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T7c4: Contribution guide for web developers. BioSchemas/specifications#685.
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T8.1: Produce infographic 'Why use Bioschemas?' BioSchemas/specifications#701.
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10 issues received 23 new comments.
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What are the actual canonical URLs of terms in bioschemas? BioSchemas/specifications#653 (6 comments by @ljgarcia, @multimeric, @ptsefton)
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Bug: Property URIs do not resolve / List of properties seems incomplete BioSchemas/specifications#679 (5 comments by @ljgarcia, @multimeric)
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T7c1: Infographic why to use Bioschemas for mortals. BioSchemas/specifications#688 (4 comments by @PhilReedData)
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Add BioHackrXiv reports to publications page BioSchemas/specifications#623 (2 comments by @PhilReedData)
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T7b1: Make titles closer match between page titles, heading and menu links. BioSchemas/specifications#694 (1 comment by @PhilReedData)
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T7b3: Direct people to the profiles vs types description, make it obvious. BioSchemas/specifications#692 (1 comment by @PhilReedData)
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T7d1: Use accessibility tools to thoroughly check site. BioSchemas/specifications#683 (1 comment by @PhilReedData)
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T7c3: Contribution guide for content writers. BioSchemas/specifications#686 (1 comment by @PhilReedData)
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Add `includedInDataset` property to all profiles BioSchemas/specifications#617 (1 comment by @gtsueng)
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BioSchemas/bioschemas.github.io
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15 pull requests opened.
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Create property pages BioSchemas/bioschemas.github.io#843, by @ljgarcia.
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Add redirection from terms (Bioschemas ns) to types BioSchemas/bioschemas.github.io#842, by @ljgarcia.
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Update script and files to include associatedDisease equivalence BioSchemas/bioschemas.github.io#841, by @ljgarcia.
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t7a2 add search feature (desktop view) BioSchemas/bioschemas.github.io#840, by @PhilReedData.
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Add support for Bioschemas types and draft types namespaces BioSchemas/bioschemas.github.io#839, by @ljgarcia.
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Create PhilReed.md BioSchemas/bioschemas.github.io#838, by @PhilReedData.
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Tool updates BioSchemas/bioschemas.github.io#837, by @gtsueng.
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T7b1 - cologne hackathon collected modifications (Nick and Helena) BioSchemas/bioschemas.github.io#836, by @nsjuty.
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Update index.html with next community call date BioSchemas/bioschemas.github.io#835, by @ljgarcia.
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Added heading to types vs profiles BioSchemas/bioschemas.github.io#833, by @PhilReedData.
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Update index.html BioSchemas/bioschemas.github.io#832, by @ljgarcia.
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News item for BioHack24 preprint BioSchemas/bioschemas.github.io#831, by @PhilReedData.
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synchronise from master BioSchemas/bioschemas.github.io#830, by @PhilReedData.
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Add backlog of presentations from BioHackEU BioSchemas/bioschemas.github.io#829, by @PhilReedData.
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10 pull requests merged.
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Tool updates BioSchemas/bioschemas.github.io#837.
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Create PhilReed.md BioSchemas/bioschemas.github.io#838.
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Add support for Bioschemas types and draft types namespaces BioSchemas/bioschemas.github.io#839.
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Update index.html with next community call date BioSchemas/bioschemas.github.io#835.
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T7b1 - cologne hackathon collected modifications (Nick and Helena) BioSchemas/bioschemas.github.io#836.
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Added heading to types vs profiles BioSchemas/bioschemas.github.io#833.
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Update index.html BioSchemas/bioschemas.github.io#832.
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News item for BioHack24 preprint BioSchemas/bioschemas.github.io#831.
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synchronise from master BioSchemas/bioschemas.github.io#830.
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Add backlog of presentations from BioHackEU BioSchemas/bioschemas.github.io#829.
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1 pull request closed.
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T7b1 BioSchemas/bioschemas.github.io#834.
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1 pull request reopened.
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Tool updates BioSchemas/bioschemas.github.io#837, by @gtsueng.
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9 pull requests received 14 new comments.
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t7a2 add search feature (desktop view) BioSchemas/bioschemas.github.io#840 (2 comments by @albangaignard, @ljgarcia)
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Add support for Bioschemas types and draft types namespaces BioSchemas/bioschemas.github.io#839 (2 comments by @albangaignard, @ljgarcia)
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Added heading to types vs profiles BioSchemas/bioschemas.github.io#833 (2 comments by @PhilReedData)
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News item for BioHack24 preprint BioSchemas/bioschemas.github.io#831 (2 comments by @egonw, @PhilReedData)
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Add backlog of presentations from BioHackEU BioSchemas/bioschemas.github.io#829 (2 comments by @egonw, @PhilReedData)
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Add redirection from terms (Bioschemas ns) to types BioSchemas/bioschemas.github.io#842 (1 comment by @ljgarcia)
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Fix link to markup generator http-only on the Software page BioSchemas/bioschemas.github.io#826 (1 comment by @ljgarcia)
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Update index.html with next community call date BioSchemas/bioschemas.github.io#835 (1 comment by @nsjuty)
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Participants
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1 participant left.
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Peter McQuilton (University of Oxford) left.
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GitHub
BioSchemas/specifications
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3 issues closed.
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Not latest Bioschemas profile URL (DDE) BioSchemas/specifications#637.
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Typo in word "Intermediate" in educationalLevel for Course BioSchemas/specifications#654.
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Incorect "rdfs:subClassOf" in "LabProtocol_v0.8-DRAFT.json" BioSchemas/specifications#678.
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1 issue received 1 new comment.
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Bug: Property URIs do not resolve / List of properties seems incomplete BioSchemas/specifications#679 (1 comment by @multimeric)
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