Bioschemas for lifesciences Community Group - Activity in 2023

GitHub

BioSchemas/bioschemas.github.io

• 10 pull requests opened.

  • 21 December 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#806, by @sahar-frikha.

  • 21 December 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#805, by @sahar-frikha.

  • 21 December 2023

    Create SaraElGebali.md BioSchemas/bioschemas.github.io#804, by @nsjuty.

  • 18 December 2023

    Fix indentation issue with LabProtocol group BioSchemas/bioschemas.github.io#803, by @ljgarcia.

  • 14 December 2023

    Add pages for new draft type LabProtocol BioSchemas/bioschemas.github.io#802, by @ljgarcia.

  • 13 December 2023

    Defined terms BioSchemas/bioschemas.github.io#801, by @gtsueng.

  • 12 December 2023

    New redirections for "terms" namespace BioSchemas/bioschemas.github.io#800, by @albangaignard.

  • 12 December 2023

    Adding the metadata for a DefinedTerm Profile BioSchemas/bioschemas.github.io#799, by @sneumann.

  • 11 December 2023

    Add pages needed for new profile labprocess BioSchemas/bioschemas.github.io#798, by @ljgarcia.

  • 7 December 2023

    Update index.html BioSchemas/bioschemas.github.io#797, by @ljgarcia.

• 8 pull requests merged.

  • 22 December 2023

    Add pages for new draft type LabProtocol BioSchemas/bioschemas.github.io#802.

  • 21 December 2023

    Added a highlight, now that we passed 50 datasets BioSchemas/bioschemas.github.io#796.

  • 21 December 2023

    Create SaraElGebali.md BioSchemas/bioschemas.github.io#804.

  • 18 December 2023

    Fix indentation issue with LabProtocol group BioSchemas/bioschemas.github.io#803.

  • 14 December 2023

    Adding the metadata for a DefinedTerm Profile BioSchemas/bioschemas.github.io#799.

  • 14 December 2023

    Add pages needed for new profile labprocess BioSchemas/bioschemas.github.io#798.

  • 12 December 2023

    New redirections for "terms" namespace BioSchemas/bioschemas.github.io#800.

  • 12 December 2023

    Update index.html BioSchemas/bioschemas.github.io#797.

• 1 pull request closed.

  • 14 December 2023

    Defined terms BioSchemas/bioschemas.github.io#801.

• 6 pull requests received 10 new comments.

  • Latest comment 28 December 2023

    add VIB live_deployments Course/CourseInstance and TrainingMaterial BioSchemas/bioschemas.github.io#795 (3 comments by @abotzki, @ljgarcia)

  • Latest comment 14 December 2023

    Defined terms BioSchemas/bioschemas.github.io#801 (3 comments by @gtsueng, @ljgarcia)

  • 22 December 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#805 (1 comment by @ljgarcia)

  • 18 December 2023

    Fix indentation issue with LabProtocol group BioSchemas/bioschemas.github.io#803 (1 comment by @nsjuty)

  • 13 December 2023

    Add pages needed for new profile labprocess BioSchemas/bioschemas.github.io#798 (1 comment by @nsjuty)

  • 8 December 2023

    Update index.html BioSchemas/bioschemas.github.io#797 (1 comment by @nsjuty)

BioSchemas/specifications

• 4 pull requests opened.

  • 21 December 2023

    Create LabProtocol_v0.8-DRAFT.json BioSchemas/specifications#664, by @ljgarcia.

  • 21 December 2023

    Update LabProtocol_v0.4-DRAFT.jsonld BioSchemas/specifications#663, by @ljgarcia.

  • 21 December 2023

    Update LabProtocol_v0.4-DRAFT.jsonld BioSchemas/specifications#662, by @ljgarcia.

  • 13 December 2023

    Update LabProtocol hierarchy and properties BioSchemas/specifications#661, by @ljgarcia.

• 5 pull requests merged.

  • 21 December 2023

    Create LabProtocol_v0.8-DRAFT.json BioSchemas/specifications#664.

  • 21 December 2023

    Update LabProtocol_v0.4-DRAFT.jsonld BioSchemas/specifications#663.

  • 21 December 2023

    Update LabProtocol_v0.4-DRAFT.jsonld BioSchemas/specifications#662.

  • 13 December 2023

    Update LabProtocol hierarchy and properties BioSchemas/specifications#661.

  • 12 December 2023

    [WIP] Add DefinedTerm profile BioSchemas/specifications#656.

• 1 pull request received 2 new comments.

  • Latest comment 13 December 2023

    Update LabProtocol hierarchy and properties BioSchemas/specifications#661 (2 comments by @gtsueng, @ljgarcia)

BioSchemas/bioschemas-dde

• 1 issue opened.

  • 21 December 2023

    Trigger manual update for draft types BioSchemas/bioschemas-dde#3, by @ljgarcia.

GitHub

BioSchemas/specifications

• 1 issue opened.

  • 1 November 2023

    New profile DefinedTermSet BioSchemas/specifications#660, by @sneumann.

• 1 issue received 7 new comments.

  • Latest comment 27 November 2023

    Best Practice: DefinedTerm from Ontologies BioSchemas/specifications#652 (7 comments by @ivanmicetic, @marco-brandizi, @sneumann)
• 1 pull request opened.

  • 1 November 2023

    computational tool quick fix BioSchemas/specifications#659, by @gtsueng.

• 1 pull request closed.

  • 1 November 2023

    computational tool quick fix BioSchemas/specifications#659.

BioSchemas/bioschemas.github.io

• 4 pull requests opened.

  • 23 November 2023

    Added a highlight, now that we passed 50 datasets BioSchemas/bioschemas.github.io#796, by @egonw.

  • 8 November 2023

    add VIB live_deployments Course/CourseInstance and TrainingMaterial BioSchemas/bioschemas.github.io#795, by @abotzki.

  • 2 November 2023

    two new properties used in Taxon profile BioSchemas/bioschemas.github.io#794, by @albangaignard.

  • 1 November 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#793, by @sahar-frikha.

• 3 pull requests merged.

  • 2 November 2023

    two new properties used in Taxon profile BioSchemas/bioschemas.github.io#794.

  • 2 November 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#793.

  • 1 November 2023

    Bioschemas property web pages to prevent 404 errors on profiles BioSchemas/bioschemas.github.io#792.

• 1 pull request received 5 new comments.

  • Latest comment 1 November 2023

    Bioschemas property web pages to prevent 404 errors on profiles BioSchemas/bioschemas.github.io#792 (5 comments by @albangaignard, @nsjuty)

Participants

• 1 participant joined.

  • 31 October 2023

    Jiri Kapinus (Evaluate Dynamics s.r.o.) joined.

• 1 organization joined.

  • 31 October 2023

    Evaluate Dynamics s.r.o. joined.

GitHub

BioSchemas/specifications

• 1 issue opened.

  • 31 October 2023

    Explain how to comply with the FAIR chemical structures specification BioSchemas/specifications#657, by @egonw.

• 1 issue received 1 new comment.

  • 31 October 2023

    Best Practice: DefinedTerm from Ontologies BioSchemas/specifications#652 (1 comment by @sneumann)
• 2 pull requests opened.

  • 31 October 2023

    Explain how to comply with the FAIR chemical structures specification BioSchemas/specifications#658, by @egonw.

  • 31 October 2023

    [WIP] Add DefinedTerm profile BioSchemas/specifications#656, by @sneumann.

• 1 pull request received 1 new comment.

  • 31 October 2023

    Explain how to comply with the FAIR chemical structures specification BioSchemas/specifications#658 (1 comment by @gtsueng)

BioSchemas/bioschemas.github.io

• 3 pull requests opened.

  • 9 October 2023

    Bioschemas property web pages to prevent 404 errors on profiles BioSchemas/bioschemas.github.io#792, by @albangaignard.

  • 8 October 2023

    Remove Galaxy Hub from LiveDeploys BioSchemas/bioschemas.github.io#791, by @sneumann.

  • 2 October 2023

    add entry for e!DAL-PGP in the "live deploy" section BioSchemas/bioschemas.github.io#790, by @arendd.

• 3 pull requests merged.

  • 26 October 2023

    Add new Pharos resource to live deploys BioSchemas/bioschemas.github.io#787.

  • 18 October 2023

    Remove Galaxy Hub from LiveDeploys BioSchemas/bioschemas.github.io#791.

  • 18 October 2023

    add entry for e!DAL-PGP in the "live deploy" section BioSchemas/bioschemas.github.io#790.

• 2 pull requests received 4 new comments.

  • Latest comment 26 October 2023

    Add new Pharos resource to live deploys BioSchemas/bioschemas.github.io#787 (2 comments by @albangaignard)

  • Latest comment 18 October 2023

    add entry for e!DAL-PGP in the "live deploy" section BioSchemas/bioschemas.github.io#790 (2 comments by @arendd, @ljgarcia)

GitHub

BioSchemas/specifications

• 3 issues opened.

  • 29 September 2023

    input/output new properties the same as object/result in CreateAction? BioSchemas/specifications#655, by @ljgarcia.

  • 18 September 2023

    Typo in word "Intermediate" in educationalLevel for Course BioSchemas/specifications#654, by @GilOliveira.

  • 7 September 2023

    What are the actual canonical URLs of terms in bioschemas? BioSchemas/specifications#653, by @ptsefton.

• 3 issues received 17 new comments.

  • Latest comment 29 September 2023

    What are the actual canonical URLs of terms in bioschemas? BioSchemas/specifications#653 (14 comments by @albangaignard, @gtsueng, @ljgarcia, @marco-brandizi, @ptsefton, @stain)

  • Latest comment 29 September 2023

    input/output new properties the same as object/result in CreateAction? BioSchemas/specifications#655 (2 comments by @albangaignard, @ljgarcia)

  • 25 September 2023

    Add hasBioPolymerSequence type to BioChemEntity BioSchemas/specifications#583 (1 comment by @egonw)

BioSchemas/bioschemas.github.io

• 6 pull requests opened.

  • 26 September 2023

    Update community call to October BioSchemas/bioschemas.github.io#789, by @ljgarcia.

  • 25 September 2023

    Added a recent presentation BioSchemas/bioschemas.github.io#788, by @egonw.

  • 8 September 2023

    Add new Pharos resource to live deploys BioSchemas/bioschemas.github.io#787, by @ljgarcia.

  • 8 September 2023

    Update commcall date BioSchemas/bioschemas.github.io#786, by @ljgarcia.

  • 6 September 2023

    Update ChrisChild.md BioSchemas/bioschemas.github.io#785, by @ljgarcia.

  • 3 September 2023

    Update live_deployment for MassBank BioSchemas/bioschemas.github.io#784, by @sneumann.

• 7 pull requests merged.

  • 26 September 2023

    Update community call to October BioSchemas/bioschemas.github.io#789.

  • 26 September 2023

    Fairchecker button live deploys BioSchemas/bioschemas.github.io#774.

  • 26 September 2023

    Update live_deployment for MassBank BioSchemas/bioschemas.github.io#784.

  • 26 September 2023

    Added a recent presentation BioSchemas/bioschemas.github.io#788.

  • 15 September 2023

    Update commcall date BioSchemas/bioschemas.github.io#786.

  • 6 September 2023

    Update ChrisChild.md BioSchemas/bioschemas.github.io#785.

  • 4 September 2023

    Delete BMUSE from live deploys BioSchemas/bioschemas.github.io#783.

• 4 pull requests received 6 new comments.

  • Latest comment 6 September 2023

    Fairchecker button live deploys BioSchemas/bioschemas.github.io#774 (3 comments by @albangaignard, @ljgarcia)

  • 26 September 2023

    Display a list of former members on the people page BioSchemas/bioschemas.github.io#772 (1 comment by @ljgarcia)

  • 15 September 2023

    Update commcall date BioSchemas/bioschemas.github.io#786 (1 comment by @ivanmicetic)

  • 8 September 2023

    Update live_deployment for MassBank BioSchemas/bioschemas.github.io#784 (1 comment by @ljgarcia)

GitHub

BioSchemas/specifications

• 2 issues opened.

  • 30 August 2023

    Best Practice: DefinedTerm from Ontologies BioSchemas/specifications#652, by @sneumann.

  • 20 August 2023

    check where the definition of MolecularEntity comes from BioSchemas/specifications#651, by @egonw.

• 1 issue closed.

  • 1 August 2023

    Fix description for sameAs BioSchemas/specifications#650.

BioSchemas/bioschemas.github.io

• 1 pull request opened.

  • 16 August 2023

    Delete BMUSE from live deploys BioSchemas/bioschemas.github.io#783, by @bedroesb.

• 1 pull request merged.

  • 16 August 2023

    Amend missing insulin image BioSchemas/bioschemas.github.io#782.

GitHub

BioSchemas/bioschemas.github.io

• 5 pull requests opened.

  • 28 July 2023

    Amend missing insulin image BioSchemas/bioschemas.github.io#782, by @M-casado.

  • 18 July 2023

    Update index.html BioSchemas/bioschemas.github.io#781, by @ljgarcia.

  • 13 July 2023

    Embedded twitter feeds do not work anymore BioSchemas/bioschemas.github.io#780, by @bedroesb.

  • 12 July 2023

    Update 1.1-DRAFT.html BioSchemas/bioschemas.github.io#779, by @gtsueng.

  • 12 July 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#778, by @sahar-frikha.

• 3 pull requests merged.

  • 19 July 2023

    Embedded twitter feeds do not work anymore BioSchemas/bioschemas.github.io#780.

  • 19 July 2023

    Update index.html BioSchemas/bioschemas.github.io#781.

  • 18 July 2023

    Update 1.1-DRAFT.html BioSchemas/bioschemas.github.io#779.

• 1 pull request closed.

  • 12 July 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#778.

• 3 pull requests received 6 new comments.

  • Latest comment 12 July 2023

    Display a list of former members on the people page BioSchemas/bioschemas.github.io#772 (3 comments by @ljgarcia, @sneumann)

  • Latest comment 18 July 2023

    Embedded twitter feeds do not work anymore BioSchemas/bioschemas.github.io#780 (2 comments by @bedroesb)

  • 12 July 2023

    Fairchecker button live deploys BioSchemas/bioschemas.github.io#774 (1 comment by @ljgarcia)

BioSchemas/specifications

• 1 issue opened.

  • 12 July 2023

    Fix description for sameAs BioSchemas/specifications#650, by @ljgarcia.

• 1 issue received 1 new comment.

  • 12 July 2023

    Fix description for sameAs BioSchemas/specifications#650 (1 comment by @gtsueng)

GitHub

BioSchemas/bioschemas.github.io

• 8 pull requests opened.

  • 25 June 2023

    Add smp case BioSchemas/bioschemas.github.io#777, by @ljgarcia.

  • 25 June 2023

    Create ml group BioSchemas/bioschemas.github.io#776, by @ljgarcia.

  • 24 June 2023

    Create 2023-06-24-BioHackathon-Europe-2023.md BioSchemas/bioschemas.github.io#775, by @nsjuty.

  • 21 June 2023

    Fairchecker button live deploys BioSchemas/bioschemas.github.io#774, by @albangaignard.

  • 20 June 2023

    Update community call date to 26 June 2023 BioSchemas/bioschemas.github.io#773, by @ivanmicetic.

  • 16 June 2023

    Display a list of former members on the people page BioSchemas/bioschemas.github.io#772, by @albangaignard.

  • 7 June 2023

    Add new group Machine Learning BioSchemas/bioschemas.github.io#771, by @ljgarcia.

  • 6 June 2023

    feat: add Metabolic Atlas as a live deploy BioSchemas/bioschemas.github.io#770, by @mihai-sysbio.

• 9 pull requests merged.

  • 30 June 2023

    fixed error in example for alternateName: wrong quotation mark BioSchemas/bioschemas.github.io#769.

  • 28 June 2023

    Add smp case BioSchemas/bioschemas.github.io#777.

  • 27 June 2023

    Create ml group BioSchemas/bioschemas.github.io#776.

  • 26 June 2023

    Update taxon type BioSchemas/bioschemas.github.io#757.

  • 26 June 2023

    feat: add Metabolic Atlas as a live deploy BioSchemas/bioschemas.github.io#770.

  • 26 June 2023

    Create 2023-06-24-BioHackathon-Europe-2023.md BioSchemas/bioschemas.github.io#775.

  • 21 June 2023

    bio.tools story BioSchemas/bioschemas.github.io#767.

  • 20 June 2023

    Update community call date to 26 June 2023 BioSchemas/bioschemas.github.io#773.

  • 9 June 2023

    Move support groups BioSchemas/bioschemas.github.io#765.

• 1 pull request closed.

  • 7 June 2023

    Add new group Machine Learning BioSchemas/bioschemas.github.io#771.

• 7 pull requests received 22 new comments.

  • Latest comment 28 June 2023

    Add smp case BioSchemas/bioschemas.github.io#777 (6 comments by @fpsom, @ljgarcia, @unode)

  • Latest comment 27 June 2023

    Create ml group BioSchemas/bioschemas.github.io#776 (6 comments by @fpsom, @ljgarcia)

  • Latest comment 28 June 2023

    fixed error in example for alternateName: wrong quotation mark BioSchemas/bioschemas.github.io#769 (3 comments by @gtsueng, @ljgarcia)

  • Latest comment 19 June 2023

    Display a list of former members on the people page BioSchemas/bioschemas.github.io#772 (3 comments by @ivanmicetic, @sneumann)

  • Latest comment 9 June 2023

    Move support groups BioSchemas/bioschemas.github.io#765 (2 comments by @albangaignard, @ljgarcia)

  • 21 June 2023

    Fairchecker button live deploys BioSchemas/bioschemas.github.io#774 (1 comment by @albangaignard)

  • 21 June 2023

    bio.tools story BioSchemas/bioschemas.github.io#767 (1 comment by @albangaignard)

BioSchemas/specifications

• 3 issues closed.

  • 27 June 2023

    LabProtocol appears not to have description BioSchemas/specifications#436.

  • 27 June 2023

    Machine readable specification files BioSchemas/specifications#106.

  • 26 June 2023

    Taxon and TaxonName BioSchemas/specifications#309.

• 6 issues received 13 new comments.

  • Latest comment 26 June 2023

    Taxon and TaxonName BioSchemas/specifications#309 (6 comments by @frmichel, @ivanmicetic, @ljgarcia, @mjy)

  • Latest comment 27 June 2023

    Add hasBioPolymerSequence type to BioChemEntity BioSchemas/specifications#583 (3 comments by @ljgarcia, @sneumann)

  • 27 June 2023

    Machine readable specification files BioSchemas/specifications#106 (1 comment by @gtsueng)

  • 26 June 2023

    Add `includedInDataset` property to all profiles BioSchemas/specifications#617 (1 comment by @ljgarcia)

  • 24 June 2023

    Update MolecularEntity profile wrt identification options BioSchemas/specifications#639 (1 comment by @ljgarcia)

  • 8 June 2023

    Bioschemas descriptions missing BioSchemas/specifications#649 (1 comment by @gtsueng)

GitHub

BioSchemas/bioschemas.github.io

• 16 pull requests opened.

  • 30 May 2023

    fixed error in example for alternateName: wrong quotation mark BioSchemas/bioschemas.github.io#769, by @DavidFichtmueller.

  • 22 May 2023

    Update 1.1-DRAFT.html BioSchemas/bioschemas.github.io#768, by @gtsueng.

  • 22 May 2023

    bio.tools story BioSchemas/bioschemas.github.io#767, by @albangaignard.

  • 19 May 2023

    Create 2023-05-20-ETL-Pipeline.md BioSchemas/bioschemas.github.io#766, by @nsjuty.

  • 11 May 2023

    Move support groups BioSchemas/bioschemas.github.io#765, by @ljgarcia.

  • 10 May 2023

    Update 1.1-DRAFT.html BioSchemas/bioschemas.github.io#764, by @ljgarcia.

  • 10 May 2023

    Fix contrast issues of property/type status BioSchemas/bioschemas.github.io#763, by @hexylena.

  • 10 May 2023

    Rename 2023-05-10-Schema-Playground to 2023-05-10-Schema-Playground.md BioSchemas/bioschemas.github.io#762, by @nsjuty.

  • 10 May 2023

    Create tags.md BioSchemas/bioschemas.github.io#761, by @nsjuty.

  • 10 May 2023

    Nsjuty patch 1 BioSchemas/bioschemas.github.io#760, by @nsjuty.

  • 10 May 2023

    Create 2023-05-10-Schema-Playground BioSchemas/bioschemas.github.io#759, by @nsjuty.

  • 10 May 2023

    Create 2023-05-10-BH2022-DDE-Profiles.md BioSchemas/bioschemas.github.io#758, by @nsjuty.

  • 1 May 2023

    Update taxon type BioSchemas/bioschemas.github.io#757, by @gtsueng.

  • 1 May 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#756, by @sahar-frikha.

  • 1 May 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#755, by @sahar-frikha.

  • 1 May 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#754, by @sahar-frikha.

• 9 pull requests merged.

  • 26 May 2023

    Create 2023-05-20-ETL-Pipeline.md BioSchemas/bioschemas.github.io#766.

  • 23 May 2023

    Update 1.1-DRAFT.html BioSchemas/bioschemas.github.io#768.

  • 11 May 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#756.

  • 10 May 2023

    Rename 2023-05-10-Schema-Playground to 2023-05-10-Schema-Playground.md BioSchemas/bioschemas.github.io#762.

  • 10 May 2023

    Update live_deployments.json BioSchemas/bioschemas.github.io#753.

  • 10 May 2023

    Nsjuty patch 1 BioSchemas/bioschemas.github.io#760.

  • 10 May 2023

    Create 2023-05-10-Schema-Playground BioSchemas/bioschemas.github.io#759.

  • 10 May 2023

    Create 2023-05-10-BH2022-DDE-Profiles.md BioSchemas/bioschemas.github.io#758.

  • 10 May 2023

    Update community call BioSchemas/bioschemas.github.io#752.

• 4 pull requests closed.

  • 11 May 2023

    Create tags.md BioSchemas/bioschemas.github.io#761.

  • 11 May 2023

    Update 1.1-DRAFT.html BioSchemas/bioschemas.github.io#764.

  • 1 May 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#755.

  • 1 May 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#754.

• 7 pull requests received 13 new comments.

  • Latest comment 27 May 2023

    Update taxon type BioSchemas/bioschemas.github.io#757 (4 comments by @frmichel, @gtsueng, @ljgarcia)

  • Latest comment 30 May 2023

    Move support groups BioSchemas/bioschemas.github.io#765 (3 comments by @ivanmicetic, @ljgarcia, @nsjuty)

  • Latest comment 22 May 2023

    Update 1.1-DRAFT.html BioSchemas/bioschemas.github.io#768 (2 comments by @gtsueng, @nsjuty)

  • 29 May 2023

    bio.tools story BioSchemas/bioschemas.github.io#767 (1 comment by @nsjuty)

  • 10 May 2023

    Create 2023-05-10-Schema-Playground BioSchemas/bioschemas.github.io#759 (1 comment by @ljgarcia)

  • 1 May 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#756 (1 comment by @gtsueng)

  • 1 May 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#755 (1 comment by @gtsueng)

BioSchemas/specifications

• 3 issues opened.

  • 19 May 2023

    Bioschemas descriptions missing BioSchemas/specifications#649, by @ljgarcia.

  • 19 May 2023

    Issues with ComputationalWorkflow properties BioSchemas/specifications#648, by @ljgarcia.

  • 10 May 2023

    Dataset Profile - hasPart property expects the type "trip" BioSchemas/specifications#647, by @NRayya.

• 2 issues closed.

  • 26 May 2023

    Request to extend Expected Types for property `measurementTechnique` with Type `DefinedTerm` BioSchemas/specifications#594.

  • 23 May 2023

    Dataset Profile - hasPart property expects the type "trip" BioSchemas/specifications#647.

• 10 issues received 13 new comments.

  • Latest comment 30 May 2023

    Issues with ComputationalWorkflow properties BioSchemas/specifications#648 (2 comments by @ljgarcia, @stain)

  • Latest comment 29 May 2023

    Details about SemanticTextAnnotation BioSchemas/specifications#640 (2 comments by @ljgarcia, @marco-brandizi)

  • Latest comment 26 May 2023

    Bioschemas descriptions missing BioSchemas/specifications#649 (2 comments by @gtsueng, @ljgarcia)

  • 26 May 2023

    Profile for medical questions, surverys, clinical tools etc? BioSchemas/specifications#635 (1 comment by @ljgarcia)

  • 26 May 2023

    Request to extend Expected Types for property `measurementTechnique` with Type `DefinedTerm` BioSchemas/specifications#594 (1 comment by @ljgarcia)

  • 23 May 2023

    Update MolecularEntity profile wrt identification options BioSchemas/specifications#639 (1 comment by @gtsueng)

  • 22 May 2023

    Dataset Profile - hasPart property expects the type "trip" BioSchemas/specifications#647 (1 comment by @gtsueng)

  • 22 May 2023

    Update GitHub actions BioSchemas/specifications#625 (1 comment by @albangaignard)

  • 19 May 2023

    Add `includedInDataset` property to all profiles BioSchemas/specifications#617 (1 comment by @ljgarcia)

  • 19 May 2023

    Taxon and TaxonName BioSchemas/specifications#309 (1 comment by @ljgarcia)

Participants

• 1 participant joined.

  • 4 April 2023

    Alex Ip (AARNet) joined.

• 1 organization joined.

  • 4 April 2023

    AARNet joined.

GitHub

BioSchemas/specifications

• 2 issues closed.

  • 17 April 2023

    Write down and make clear the benefits of BioSchemas BioSchemas/specifications#59.

  • 17 April 2023

    Add schema:sameAs property for all profiles BioSchemas/specifications#567.

• 7 issues received 19 new comments.

  • Latest comment 28 April 2023

    Taxon and TaxonName BioSchemas/specifications#309 (7 comments by @frmichel, @gtsueng, @ivanmicetic, @ljgarcia)

  • Latest comment 27 April 2023

    Add hasBioPolymerSequence type to BioChemEntity BioSchemas/specifications#583 (7 comments by @gtsueng, @ivanmicetic, @ljgarcia)

  • 26 April 2023

    Update GitHub actions BioSchemas/specifications#625 (1 comment by @ljgarcia)

  • 24 April 2023

    Add `includedInDataset` property to all profiles BioSchemas/specifications#617 (1 comment by @gtsueng)

  • 24 April 2023

    Update MolecularEntity profile wrt identification options BioSchemas/specifications#639 (1 comment by @ljgarcia)

  • 17 April 2023

    Incorporation of other standards? BioSchemas/specifications#633 (1 comment by @gtsueng)

  • 17 April 2023

    Details about SemanticTextAnnotation BioSchemas/specifications#640 (1 comment by @gtsueng)
• 3 pull requests opened.

  • 6 April 2023

    Add files via upload BioSchemas/specifications#646, by @nsjuty.

  • 6 April 2023

    Add files via upload BioSchemas/specifications#645, by @nsjuty.

  • 6 April 2023

    Add files via upload BioSchemas/specifications#644, by @nsjuty.

• 3 pull requests merged.

  • 6 April 2023

    Add files via upload BioSchemas/specifications#646.

  • 6 April 2023

    Add files via upload BioSchemas/specifications#645.

  • 6 April 2023

    Add files via upload BioSchemas/specifications#644.

• 1 pull request closed.

  • 21 April 2023

    Add MobiDB examples for DataCatalog and DataRecord BioSchemas/specifications#425.

BioSchemas/bioschemas.github.io

• 8 pull requests opened.

  • 27 April 2023

    Update live_deployments.json BioSchemas/bioschemas.github.io#753, by @ljgarcia.

  • 24 April 2023

    Update community call BioSchemas/bioschemas.github.io#752, by @ljgarcia.

  • 11 April 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#751, by @sahar-frikha.

  • 6 April 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#750, by @sahar-frikha.

  • 6 April 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#749, by @sahar-frikha.

  • 6 April 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#748, by @sahar-frikha.

  • 5 April 2023

    Add new members with pages BioSchemas/bioschemas.github.io#747, by @ljgarcia.

  • 2 April 2023

    Update LabProtocols.md BioSchemas/bioschemas.github.io#746, by @nsjuty.

• 7 pull requests merged.

  • 26 April 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#749.

  • 26 April 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#750.

  • 6 April 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#748.

  • 5 April 2023

    Update index.html BioSchemas/bioschemas.github.io#743.

  • 5 April 2023

    Add new members with pages BioSchemas/bioschemas.github.io#747.

  • 5 April 2023

    Update gene protein type BioSchemas/bioschemas.github.io#745.

  • 3 April 2023

    Update LabProtocols.md BioSchemas/bioschemas.github.io#746.

• 2 pull requests closed.

  • 11 April 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#751.

  • 5 April 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#744.

• 5 pull requests received 7 new comments.

  • Latest comment 6 April 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#748 (3 comments by @gtsueng, @ljgarcia)

  • 6 April 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#750 (1 comment by @gtsueng)

  • 6 April 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#749 (1 comment by @gtsueng)

  • 5 April 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#744 (1 comment by @ljgarcia)

  • 3 April 2023

    Update LabProtocols.md BioSchemas/bioschemas.github.io#746 (1 comment by @albangaignard)

GitHub

BioSchemas/bioschemas.github.io

• 8 pull requests opened.

  • 27 March 2023

    Update gene protein type BioSchemas/bioschemas.github.io#745, by @gtsueng.

  • 27 March 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#744, by @sahar-frikha.

  • 27 March 2023

    Update index.html BioSchemas/bioschemas.github.io#743, by @ljgarcia.

  • 17 March 2023

    Update Training.md BioSchemas/bioschemas.github.io#742, by @ljgarcia.

  • 16 March 2023

    Update 1.1-DRAFT.html BioSchemas/bioschemas.github.io#741, by @gtsueng.

  • 16 March 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#740, by @sahar-frikha.

  • 8 March 2023

    Use name when deployments are listed / profile in the live deployments BioSchemas/bioschemas.github.io#739, by @bedroesb.

  • 7 March 2023

    Hide Page/SMV/BMUSE buttons if missing or invalid exampleURL BioSchemas/bioschemas.github.io#738, by @ivanmicetic.

• 8 pull requests merged.

  • 27 March 2023

    Create BioChemEntity 0.8-DRAFT BioSchemas/bioschemas.github.io#724.

  • 27 March 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#727.

  • 27 March 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#734.

  • 27 March 2023

    Software page with bioschemas markup BioSchemas/bioschemas.github.io#735.

  • 20 March 2023

    Update Training.md BioSchemas/bioschemas.github.io#742.

  • 20 March 2023

    Use name when deployments are listed / profile in the live deployments BioSchemas/bioschemas.github.io#739.

  • 16 March 2023

    Update 1.1-DRAFT.html BioSchemas/bioschemas.github.io#741.

  • 16 March 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#740.

• 2 pull requests closed.

  • 20 March 2023

    Hide Page/SMV/BMUSE buttons if missing or invalid exampleURL BioSchemas/bioschemas.github.io#738.

  • 16 March 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#736.

• 5 pull requests received 8 new comments.

  • Latest comment 27 March 2023

    Software page with bioschemas markup BioSchemas/bioschemas.github.io#735 (2 comments by @bedroesb, @ljgarcia)

  • Latest comment 20 March 2023

    Use name when deployments are listed / profile in the live deployments BioSchemas/bioschemas.github.io#739 (2 comments by @bedroesb, @ivanmicetic)

  • Latest comment 20 March 2023

    Update Training.md BioSchemas/bioschemas.github.io#742 (2 comments by @ivanmicetic, @ljgarcia)

  • 20 March 2023

    Hide Page/SMV/BMUSE buttons if missing or invalid exampleURL BioSchemas/bioschemas.github.io#738 (1 comment by @ivanmicetic)

  • 16 March 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#740 (1 comment by @gtsueng)

BioSchemas/specifications

• 4 issues opened.

  • 16 March 2023

    Display optional requirements for profiles on website BioSchemas/specifications#642, by @gtsueng.

  • 7 March 2023

    Replace exampleURLs with resource name in Live Deploys/By Profile BioSchemas/specifications#641, by @ivanmicetic.

  • 7 March 2023

    Details about SemanticTextAnnotation BioSchemas/specifications#640, by @marco-brandizi.

  • 6 March 2023

    Update MolecularEntity profile wrt identification options BioSchemas/specifications#639, by @ljgarcia.

• 3 issues closed.

  • 16 March 2023

    Display optional requirements for profiles on website BioSchemas/specifications#642.

  • 16 March 2023

    Mandation of FormalParameters BioSchemas/specifications#563.

  • 16 March 2023

    Add applicationSubCategory and featureList properties to ComputationalWorkflow BioSchemas/specifications#564.

• 5 issues received 12 new comments.

  • Latest comment 27 March 2023

    Add hasBioPolymerSequence type to BioChemEntity BioSchemas/specifications#583 (4 comments by @gtsueng, @ljgarcia)

  • Latest comment 20 March 2023

    Replace exampleURLs with resource name in Live Deploys/By Profile BioSchemas/specifications#641 (4 comments by @bedroesb, @ivanmicetic)

  • Latest comment 18 March 2023

    Details about SemanticTextAnnotation BioSchemas/specifications#640 (2 comments by @gtsueng, @marco-brandizi)

  • 27 March 2023

    Update GitHub actions BioSchemas/specifications#625 (1 comment by @ljgarcia)

  • 9 March 2023

    getting to the formal specification BioSchemas/specifications#577 (1 comment by @stain)

GitHub

BioSchemas/bioschemas.github.io

• 7 pull requests opened.

  • 28 February 2023

    Update call date and time (moving to summer time) BioSchemas/bioschemas.github.io#737, by @ljgarcia.

  • 23 February 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#736, by @sahar-frikha.

  • 22 February 2023

    Software page with bioschemas markup BioSchemas/bioschemas.github.io#735, by @albangaignard.

  • 17 February 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#734, by @sahar-frikha.

  • 17 February 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#733, by @sahar-frikha.

  • 17 February 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#732, by @sahar-frikha.

  • 11 February 2023

    Update commcall feb2023 BioSchemas/bioschemas.github.io#731, by @ljgarcia.

• 3 pull requests merged.

  • 28 February 2023

    Update call date and time (moving to summer time) BioSchemas/bioschemas.github.io#737.

  • 13 February 2023

    Update commcall feb2023 BioSchemas/bioschemas.github.io#731.

  • 5 February 2023

    Extending upon the NFDI4Chem post BioSchemas/bioschemas.github.io#730.

• 2 pull requests closed.

  • 17 February 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#733.

  • 17 February 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#732.

• 7 pull requests received 10 new comments.

  • Latest comment 27 February 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#736 (2 comments by @gtsueng)

  • Latest comment 24 February 2023

    Software page with bioschemas markup BioSchemas/bioschemas.github.io#735 (2 comments by @albangaignard, @bedroesb)

  • Latest comment 5 February 2023

    Extending upon the NFDI4Chem post BioSchemas/bioschemas.github.io#730 (2 comments by @ljgarcia, @sneumann)

  • 28 February 2023

    Update call date and time (moving to summer time) BioSchemas/bioschemas.github.io#737 (1 comment by @ivanmicetic)

  • 17 February 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#734 (1 comment by @gtsueng)

  • 17 February 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#733 (1 comment by @gtsueng)

  • 17 February 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#732 (1 comment by @gtsueng)

BioSchemas/specifications

• 7 issues opened.

  • 17 February 2023

    BioSample referenced as type only in JSON-LD BioSchemas/specifications#638, by @thomasrosnet.

  • 17 February 2023

    Not latest Bioschemas profile URL (DDE) BioSchemas/specifications#637, by @thomasrosnet.

  • 17 February 2023

    Incomplete Bioschemas profile URL (DDE) BioSchemas/specifications#636, by @thomasrosnet.

  • 6 February 2023

    Profile for medical questions, surverys, clinical tools etc? BioSchemas/specifications#635, by @dbolser.

  • 6 February 2023

    GitHub action workflow link is dead BioSchemas/specifications#634, by @albangaignard.

  • 2 February 2023

    Incorporation of other standards? BioSchemas/specifications#633, by @jjkoehorst.

  • 1 February 2023

    Issue with ComputationalWorkflow inputs and outputs BioSchemas/specifications#632, by @albangaignard.

• 4 issues closed.

  • 17 February 2023

    Sample profile includes both @id and rdf:type BioSchemas/specifications#590.

  • 17 February 2023

    Acknowledging Funding in Schema.org? BioSchemas/specifications#133.

  • 17 February 2023

    Incomplete Bioschemas profile URL (DDE) BioSchemas/specifications#636.

  • 6 February 2023

    GitHub action workflow link is dead BioSchemas/specifications#634.

• 8 issues received 10 new comments.

  • Latest comment 17 February 2023

    BioSample referenced as type only in JSON-LD BioSchemas/specifications#638 (2 comments by @gtsueng)

  • Latest comment 1 February 2023

    Issue with ComputationalWorkflow inputs and outputs BioSchemas/specifications#632 (2 comments by @albangaignard, @matuskalas)

  • 27 February 2023

    Request to extend Expected Types for property `measurementTechnique` with Type `DefinedTerm` BioSchemas/specifications#594 (1 comment by @gtsueng)

  • 27 February 2023

    Taxon and TaxonName BioSchemas/specifications#309 (1 comment by @frmichel)

  • 27 February 2023

    Add `includedInDataset` property to all profiles BioSchemas/specifications#617 (1 comment by @ivanmicetic)

  • 17 February 2023

    Not latest Bioschemas profile URL (DDE) BioSchemas/specifications#637 (1 comment by @gtsueng)

  • 17 February 2023

    Incomplete Bioschemas profile URL (DDE) BioSchemas/specifications#636 (1 comment by @gtsueng)

  • 6 February 2023

    GitHub action workflow link is dead BioSchemas/specifications#634 (1 comment by @albangaignard)
• 1 pull request merged.

  • 27 February 2023

    Project5-mcb-Added PR template BioSchemas/specifications#602.

GitHub

BioSchemas/specifications

• 3 issues opened.

  • 30 January 2023

    Discussion: how to describe distribution o a training dataset BioSchemas/specifications#631, by @ljgarcia.

  • 30 January 2023

    Discussion: How to describe the intended ML task of a training Dataset? BioSchemas/specifications#630, by @ljgarcia.

  • 24 January 2023

    Discussion: how to describe the nature of the content for Datasets? BioSchemas/specifications#629, by @ljgarcia.

• 8 issues closed.

  • 24 January 2023

    Update Dataset/DataCatalog profiles and tutorials BioSchemas/specifications#619.

  • 14 January 2023

    Edit jsonld version 0.6-DRAFT for Dataset BioSchemas/specifications#624.

  • 5 January 2023

    LabProtocol confusion BioSchemas/specifications#331.

  • 5 January 2023

    LabProtocol minimum requirements (title) BioSchemas/specifications#438.

  • 5 January 2023

    LabProtocol element protocolAdvantage description not clear in combination with property BioSchemas/specifications#440.

  • 5 January 2023

    totalTime definition in LabProtocols BioSchemas/specifications#441.

  • 5 January 2023

    reagentsUsed BioSchemas/specifications#442.

  • 5 January 2023

    LabProtocol profile base type BioSchemas/specifications#443.

• 7 issues received 13 new comments.

  • Latest comment 30 January 2023

    Discussion: how to describe the nature of the content for Datasets? BioSchemas/specifications#629 (4 comments by @arendd, @frmichel, @ljgarcia)

  • Latest comment 19 January 2023

    Taxon and TaxonName BioSchemas/specifications#309 (3 comments by @frmichel, @ljgarcia)

  • Latest comment 14 January 2023

    Edit jsonld version 0.6-DRAFT for Dataset BioSchemas/specifications#624 (2 comments by @gtsueng, @ljgarcia)

  • 30 January 2023

    Request to extend Expected Types for property `measurementTechnique` with Type `DefinedTerm` BioSchemas/specifications#594 (1 comment by @sneumann)

  • 24 January 2023

    Actually Create the BioChemicalReaction profile BioSchemas/specifications#601 (1 comment by @ljgarcia)

  • 24 January 2023

    Update Dataset/DataCatalog profiles and tutorials BioSchemas/specifications#619 (1 comment by @ljgarcia)

  • 12 January 2023

    MolecularEntity profile missing subjectOf inherited from Thing BioSchemas/specifications#593 (1 comment by @gtsueng)
• 1 pull request merged.

  • 12 January 2023

    Added subjectOf to MolecularEntity profile as optional property BioSchemas/specifications#628.

BioSchemas/bioschemas.github.io

• 5 pull requests opened.

  • 24 January 2023

    Extending upon the NFDI4Chem post BioSchemas/bioschemas.github.io#730, by @sneumann.

  • 19 January 2023

    Update live_deployments.json BioSchemas/bioschemas.github.io#729, by @ljgarcia.

  • 13 January 2023

    Added Bioregistry that now has Dataset annotation BioSchemas/bioschemas.github.io#728, by @egonw.

  • 12 January 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#727, by @sahar-frikha.

  • 11 January 2023

    Biodiversity tutorial BioSchemas/bioschemas.github.io#726, by @frmichel.

• 6 pull requests merged.

  • 23 January 2023

    Update live_deployments.json BioSchemas/bioschemas.github.io#729.

  • 18 January 2023

    Double H1 titles BioSchemas/bioschemas.github.io#725.

  • 16 January 2023

    Added Bioregistry that now has Dataset annotation BioSchemas/bioschemas.github.io#728.

  • 14 January 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#721.

  • 14 January 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#698.

  • 14 January 2023

    Biodiversity tutorial BioSchemas/bioschemas.github.io#726.

• 5 pull requests received 13 new comments.

  • Latest comment 19 January 2023

    Auto-Rendering Profile BioSchemas/bioschemas.github.io#727 (5 comments by @egonw, @gtsueng, @ljgarcia)

  • Latest comment 14 January 2023

    Added Bioregistry that now has Dataset annotation BioSchemas/bioschemas.github.io#728 (4 comments by @cthoyt, @egonw, @ljgarcia)

  • Latest comment 19 January 2023

    Create BioChemEntity 0.8-DRAFT BioSchemas/bioschemas.github.io#724 (2 comments by @gtsueng, @ljgarcia)

  • 16 January 2023

    Biodiversity tutorial BioSchemas/bioschemas.github.io#726 (1 comment by @frmichel)

  • 14 January 2023

    Double H1 titles BioSchemas/bioschemas.github.io#725 (1 comment by @ljgarcia)