Bioschemas for lifesciences Community Group - Activity in 2021
No matches.
GitHub
BioSchemas/bioschemas.github.io
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5 pull requests opened.
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Add bio.tools sitemap BioSchemas/bioschemas.github.io#501, by @AlasdairGray.
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Adding hPSCreg and EBiSC to live deploys BioSchemas/bioschemas.github.io#500, by @AlasdairGray.
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SWAT4HCLS 2022 Tutorial BioSchemas/bioschemas.github.io#499, by @AlasdairGray.
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Fixing live deploy link and usecase link in profiles BioSchemas/bioschemas.github.io#498, by @bedroesb.
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Add as attendee BioSchemas/bioschemas.github.io#497, by @ivanmicetic.
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6 pull requests merged.
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Adding hPSCreg and EBiSC to live deploys BioSchemas/bioschemas.github.io#500.
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SWAT4HCLS 2022 Tutorial BioSchemas/bioschemas.github.io#499.
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Add as attendee BioSchemas/bioschemas.github.io#497.
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Fixing live deploy link and usecase link in profiles BioSchemas/bioschemas.github.io#498.
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Some fixes to the meeting pages BioSchemas/bioschemas.github.io#494.
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Adding RDMkit to live deploys BioSchemas/bioschemas.github.io#496.
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3 pull requests received 8 new comments.
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Adding RDMkit to live deploys BioSchemas/bioschemas.github.io#496 (3 comments by @AlasdairGray, @bedroesb)
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Some fixes to the meeting pages BioSchemas/bioschemas.github.io#494 (3 comments by @AlasdairGray, @bedroesb)
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Fixing live deploy link and usecase link in profiles BioSchemas/bioschemas.github.io#498 (2 comments by @bedroesb)
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GitHub
BioSchemas/bioschemas.github.io
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19 pull requests opened.
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Adding RDMkit to live deploys BioSchemas/bioschemas.github.io#496, by @bedroesb.
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Reinstate ComputationalWorkflow to types, remove unnecessary styling information BioSchemas/bioschemas.github.io#495, by @bedroesb.
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Some fixes to the meeting pages BioSchemas/bioschemas.github.io#494, by @bedroesb.
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Update next community call date BioSchemas/bioschemas.github.io#493, by @AlasdairGray.
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Implement changes on issue 561 BioSchemas/bioschemas.github.io#492, by @ljgarcia.
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Unify redirections BioSchemas/bioschemas.github.io#491, by @ljgarcia.
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Add PED to live deploy list BioSchemas/bioschemas.github.io#490, by @AlasdairGray.
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Fix broken link BioSchemas/bioschemas.github.io#489, by @AlasdairGray.
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Add metanetx to live deploy list BioSchemas/bioschemas.github.io#487, by @AlasdairGray.
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Include RDA presentation BioSchemas/bioschemas.github.io#486, by @AlasdairGray.
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Add Bgee to live deploys BioSchemas/bioschemas.github.io#485, by @AlasdairGray.
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Embed BioHackathon reporting slides BioSchemas/bioschemas.github.io#484, by @AlasdairGray.
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Some guidance for when to select MolecularEntity and ChemicalSubstance BioSchemas/bioschemas.github.io#483, by @egonw.
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Some small visual fixes BioSchemas/bioschemas.github.io#482, by @bedroesb.
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Add details of RDA18 and ELIXIR Data/InterOp meetings BioSchemas/bioschemas.github.io#481, by @AlasdairGray.
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Update date of publishing BioSchemas/bioschemas.github.io#480, by @AlasdairGray.
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Fix link to crosswalk GSheet BioSchemas/bioschemas.github.io#479, by @AlasdairGray.
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Create Pull Release template for profile release BioSchemas/bioschemas.github.io#478, by @AlasdairGray.
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21 pull requests merged.
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Unify redirections BioSchemas/bioschemas.github.io#491.
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Reinstate ComputationalWorkflow to types, remove unnecessary styling information BioSchemas/bioschemas.github.io#495.
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Update next community call date BioSchemas/bioschemas.github.io#493.
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Implement changes on issue 561 BioSchemas/bioschemas.github.io#492.
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Some guidance for when to select MolecularEntity and ChemicalSubstance BioSchemas/bioschemas.github.io#483.
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Fix broken link BioSchemas/bioschemas.github.io#489.
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Add metanetx to live deploy list BioSchemas/bioschemas.github.io#487.
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Add Bgee to live deploys BioSchemas/bioschemas.github.io#485.
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Embed BioHackathon reporting slides BioSchemas/bioschemas.github.io#484.
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Add PED to live deploy list BioSchemas/bioschemas.github.io#490.
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Typo BioSchemas/bioschemas.github.io#488.
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Add more detail to adding markup tutorial BioSchemas/bioschemas.github.io#447.
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Include RDA presentation BioSchemas/bioschemas.github.io#486.
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Some small visual fixes BioSchemas/bioschemas.github.io#482.
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Add details of RDA18 and ELIXIR Data/InterOp meetings BioSchemas/bioschemas.github.io#481.
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Create Pull Release template for profile release BioSchemas/bioschemas.github.io#478.
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Update date of publishing BioSchemas/bioschemas.github.io#480.
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SequenceAnnotation 0.7-DRAFT and SequenceRange 0.1-DRAFT BioSchemas/bioschemas.github.io#472.
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ComputationalTool 1.0-RELEASE BioSchemas/bioschemas.github.io#468.
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Fix link to crosswalk GSheet BioSchemas/bioschemas.github.io#479.
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Add standard properties to all profiles BioSchemas/bioschemas.github.io#474.
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13 pull requests received 48 new comments.
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Unify redirections BioSchemas/bioschemas.github.io#491 (11 comments by @AlasdairGray, @bedroesb, @ljgarcia)
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Adding RDMkit to live deploys BioSchemas/bioschemas.github.io#496 (9 comments by @AlasdairGray, @bedroesb)
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Some guidance for when to select MolecularEntity and ChemicalSubstance BioSchemas/bioschemas.github.io#483 (7 comments by @AlasdairGray, @ljgarcia)
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Add more detail to adding markup tutorial BioSchemas/bioschemas.github.io#447 (5 comments by @bedroesb, @ljgarcia)
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ComputationalTool 1.0-RELEASE BioSchemas/bioschemas.github.io#468 (4 comments by @AlasdairGray, @ljgarcia)
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SequenceAnnotation 0.7-DRAFT and SequenceRange 0.1-DRAFT BioSchemas/bioschemas.github.io#472 (3 comments by @AlasdairGray, @ljgarcia)
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Reinstate ComputationalWorkflow to types, remove unnecessary styling information BioSchemas/bioschemas.github.io#495 (2 comments by @bedroesb)
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Embed BioHackathon reporting slides BioSchemas/bioschemas.github.io#484 (1 comment by @AlasdairGray)
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Create Pull Release template for profile release BioSchemas/bioschemas.github.io#478 (1 comment by @AlasdairGray)
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Add standard properties to all profiles BioSchemas/bioschemas.github.io#474 (1 comment by @ljgarcia)
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BioSchemas/specifications
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19 issues opened.
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Add applicationSubCategory and featureList properties to ComputationalWorkflow BioSchemas/specifications#564, by @stuzart.
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Mandation of FormalParameters BioSchemas/specifications#563, by @alaninmcr.
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prefix for FormalParameters BioSchemas/specifications#562, by @alaninmcr.
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Add Damalos as Scholarly Article live deploy BioSchemas/specifications#561, by @AlasdairGray.
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What to use in place of schema:additionalType? BioSchemas/specifications#560, by @marco-brandizi.
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Study hasGrowthChamber should be replaced by hasGrowthFacility BioSchemas/specifications#559, by @cpommier.
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Extension of the Gene type expressedIn property BioSchemas/specifications#557, by @smoretti.
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Problems with schema:studyLocation for the bioschema:Study profile BioSchemas/specifications#556, by @marco-brandizi.
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Add PED to live deploys BioSchemas/specifications#555, by @AlasdairGray.
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Add paragraph about chemical profiles to Choosing the Right Profile tutorial BioSchemas/specifications#554, by @ljgarcia.
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Write tutorial to create a new profile with DDE BioSchemas/specifications#553, by @AlasdairGray.
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Write tutorial to update an existing profile with DDE BioSchemas/specifications#552, by @AlasdairGray.
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Write updated profiles back to specifications repository BioSchemas/specifications#551, by @AlasdairGray.
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Read seed profiles into DDE BioSchemas/specifications#550, by @AlasdairGray.
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Seed profiles using the JSON-Schema generated by Manchester tool BioSchemas/specifications#549, by @AlasdairGray.
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Tutorials need to cover string sequences containing special characters BioSchemas/specifications#548, by @AlasdairGray.
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Add paragraph about ComputationTool to Choosing the Right Profile tutorial BioSchemas/specifications#547, by @AlasdairGray.
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Add ComputationalTool latests relase example to specifications repo BioSchemas/specifications#546, by @ljgarcia.
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Add PathVisio to live deploys BioSchemas/specifications#545, by @AlasdairGray.
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8 issues closed.
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Add Damalos as Scholarly Article live deploy BioSchemas/specifications#561.
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Add PED to live deploys BioSchemas/specifications#555.
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What to use in place of schema:additionalType? BioSchemas/specifications#560.
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Update and refresh existing tutorials BioSchemas/specifications#488.
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Tutorials need to cover string sequences containing special characters BioSchemas/specifications#548.
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Recommend usage of @type and @id BioSchemas/specifications#294.
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Recommend property to connect markup to profile to which it conforms BioSchemas/specifications#481.
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ComputationalTool 0.5-DRAFT uses properties outside of schema.org BioSchemas/specifications#466.
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8 issues received 27 new comments.
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Extension of the Gene type expressedIn property BioSchemas/specifications#557 (9 comments by @AlasdairGray, @marco-brandizi, @smoretti, @tarcisiotmf)
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Problems with schema:studyLocation for the bioschema:Study profile BioSchemas/specifications#556 (6 comments by @AlasdairGray, @bedroesb, @cpommier, @DanFaria, @marco-brandizi)
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Revise How to add markup tutorial BioSchemas/specifications#514 (3 comments by @AlasdairGray, @ljgarcia)
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Tutorials need to cover string sequences containing special characters BioSchemas/specifications#548 (3 comments by @AlasdairGray, @ljgarcia)
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What to use in place of schema:additionalType? BioSchemas/specifications#560 (2 comments by @AlasdairGray, @marco-brandizi)
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Cardinality contradiction on keywords property on Dataset 0.4-DRAFT BioSchemas/specifications#501 (2 comments by @egonw, @ljgarcia)
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Add paragraph about chemical profiles to Choosing the Right Profile tutorial BioSchemas/specifications#554 (1 comment by @ljgarcia)
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1 pull request opened.
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Removed symlink BioSchemas/specifications#558, by @AlasdairGray.
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1 pull request merged.
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Removed symlink BioSchemas/specifications#558.
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BioSchemas/bioschemas-dde
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1 issue opened.
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Merger script suggestion: Include schemaVersion for the class BioSchemas/bioschemas-dde#1, by @gtsueng.
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1 issue received 2 new comments.
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Merger script suggestion: Include schemaVersion for the class BioSchemas/bioschemas-dde#1 (2 comments by @AlasdairGray, @gtsueng)
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BioSchemas/bioschemas-data-harvesting
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1 issue opened.
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Update README with details of harvested data BioSchemas/bioschemas-data-harvesting#2, by @AlasdairGray.
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BioSchemas/governance
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1 pull request opened.
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Update governance.md BioSchemas/governance#4, by @ljgarcia.
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GitHub
BioSchemas/bioschemas.github.io
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11 pull requests opened.
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Update next call date BioSchemas/bioschemas.github.io#477, by @AlasdairGray.
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Update DisProt and MobiDB live deployments BioSchemas/bioschemas.github.io#476, by @ivanmicetic.
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Update MobiDB URL and profile versions in live deployments BioSchemas/bioschemas.github.io#475, by @ivanmicetic.
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Add standard properties to all profiles BioSchemas/bioschemas.github.io#474, by @AlasdairGray.
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News item for ComputationalTool RFC BioSchemas/bioschemas.github.io#473, by @AlasdairGray.
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SequenceAnnotation 0.7-DRAFT and SequenceRange 0.1-DRAFT BioSchemas/bioschemas.github.io#472, by @AlasdairGray.
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Update DisProt live deploy BioSchemas/bioschemas.github.io#471, by @AlasdairGray.
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New screenshot BioSchemas/bioschemas.github.io#470, by @bedroesb.
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Some minor changes BioSchemas/bioschemas.github.io#469, by @bedroesb.
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ComputationalTool 1.0-RELEASE BioSchemas/bioschemas.github.io#468, by @AlasdairGray.
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Enable /liveDeploys/ to land on the page BioSchemas/bioschemas.github.io#467, by @AlasdairGray.
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10 pull requests merged.
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Update next call date BioSchemas/bioschemas.github.io#477.
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Add ChEMBL Data Catalog to live deploys BioSchemas/bioschemas.github.io#458.
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Update DisProt and MobiDB live deployments BioSchemas/bioschemas.github.io#476.
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News item for ComputationalTool RFC BioSchemas/bioschemas.github.io#473.
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New screenshot BioSchemas/bioschemas.github.io#470.
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Update DisProt live deploy BioSchemas/bioschemas.github.io#471.
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Some minor changes BioSchemas/bioschemas.github.io#469.
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Enable /liveDeploys/ to land on the page BioSchemas/bioschemas.github.io#467.
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Remove ELIXIR-PT from Live Deploys list BioSchemas/bioschemas.github.io#464.
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Add links to meetings and publications BioSchemas/bioschemas.github.io#465.
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1 pull request closed.
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Update MobiDB URL and profile versions in live deployments BioSchemas/bioschemas.github.io#475.
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7 pull requests received 23 new comments.
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ComputationalTool 1.0-RELEASE BioSchemas/bioschemas.github.io#468 (13 comments by @AlasdairGray, @albangaignard, @egonw, @ljgarcia, @mr-c)
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SequenceAnnotation 0.7-DRAFT and SequenceRange 0.1-DRAFT BioSchemas/bioschemas.github.io#472 (3 comments by @ljgarcia)
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Add standard properties to all profiles BioSchemas/bioschemas.github.io#474 (2 comments by @AlasdairGray, @albangaignard)
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Add ChEMBL Data Catalog to live deploys BioSchemas/bioschemas.github.io#458 (2 comments by @AlasdairGray, @ljgarcia)
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Add more detail to adding markup tutorial BioSchemas/bioschemas.github.io#447 (1 comment by @AlasdairGray)
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Enable /liveDeploys/ to land on the page BioSchemas/bioschemas.github.io#467 (1 comment by @bedroesb)
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BioSchemas/bioschemas-data-harvesting
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1 issue opened.
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Orphanet not detected as sitemap BioSchemas/bioschemas-data-harvesting#1, by @AlasdairGray.
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BioSchemas/specifications
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6 issues opened.
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Add version to CHEMBL live deploys BioSchemas/specifications#544, by @ljgarcia.
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ID property should be mandatory for FormalParameters BioSchemas/specifications#543, by @albangaignard.
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Update Gene, Protein, SequenceRange, and SequenceAnnotation types to match latest profile BioSchemas/specifications#542, by @AlasdairGray.
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Add orientation details to sequenceOrientation property in SequenceAnnotation type BioSchemas/specifications#541, by @AlasdairGray.
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SequenceAnnotation example for a Gene Sequence BioSchemas/specifications#540, by @AlasdairGray.
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Screenshots in tutorials are outdated BioSchemas/specifications#539, by @bedroesb.
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4 issues closed.
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Create SequenceAnnotation profile BioSchemas/specifications#468.
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Extend Protein Profile to include link to SequenceAnnotation BioSchemas/specifications#469.
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SequenceAnnotation definition BioSchemas/specifications#283.
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additionalType still in use, its use is discouraged by Bioschemas (double check with @AlasdairGray ) BioSchemas/specifications#538.
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10 issues received 21 new comments.
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Recommend usage of @type and @id BioSchemas/specifications#294 (5 comments by @AlasdairGray, @bedroesb)
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ID property should be mandatory for FormalParameters BioSchemas/specifications#543 (3 comments by @alaninmcr, @AlasdairGray, @ljgarcia)
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additionalType still in use, its use is discouraged by Bioschemas (double check with @AlasdairGray ) BioSchemas/specifications#538 (3 comments by @AlasdairGray, @albangaignard, @ljgarcia)
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ComputationalTool 0.5-DRAFT uses properties outside of schema.org BioSchemas/specifications#466 (3 comments by @AlasdairGray, @albangaignard, @ljgarcia)
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Update Gene, Protein, SequenceRange, and SequenceAnnotation types to match latest profile BioSchemas/specifications#542 (2 comments by @ljgarcia)
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Cardinality contradiction on keywords property on Dataset 0.4-DRAFT BioSchemas/specifications#501 (1 comment by @egonw)
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Add orientation details to sequenceOrientation property in SequenceAnnotation type BioSchemas/specifications#541 (1 comment by @ljgarcia)
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Participants
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1 participant joined.
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Ammar Ammar (Maastricht University) joined.
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GitHub
BioSchemas/specifications
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5 issues opened.
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additionalType still in use, its use is discouraged by Bioschemas (double check with @AlasdairGray ) BioSchemas/specifications#538, by @albangaignard.
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Website Content Review BioSchemas/specifications#537, by @AlasdairGray.
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ComputationalWorkflow profile to FormalParameter BioSchemas/specifications#536, by @alaninmcr.
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creator profile has it can have MANY, and an example of that is welcome BioSchemas/specifications#535, by @egonw.
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Person profile is very strange BioSchemas/specifications#534, by @alaninmcr.
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19 issues closed.
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Ontology vocabulary for featurelist property (Tools) BioSchemas/specifications#123.
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Tool Citation should only be CreativeWork BioSchemas/specifications#159.
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Add examples to Tools specification BioSchemas/specifications#184.
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Reconcile Workflow with Tool BioSchemas/specifications#374.
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Revision bioschemas/Tools vs spreadsheet 0.5 DRAFT BioSchemas/specifications#454.
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Is MediaObject the appropriate type for the input and output of a ComputationalTool? BioSchemas/specifications#465.
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ToDos remaining in ComputationalTool 0.5-DRAFT BioSchemas/specifications#467.
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How to make the distinction between multiple input / output parameters sharing the same "type" (EDAM data class) ? BioSchemas/specifications#471.
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Agree properties for capturing input and output BioSchemas/specifications#526.
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ELIXIR-PT example training URL no longer resolves BioSchemas/specifications#525.
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Update Markup Example Tutorial BioSchemas/specifications#507.
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Recent News Feed BioSchemas/specifications#513.
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Tidy up CSS BioSchemas/specifications#503.
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Live deploys per node tab BioSchemas/specifications#505.
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Using relative links on the website BioSchemas/specifications#528.
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Mobile device display issues BioSchemas/specifications#527.
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Click/Link issue BioSchemas/specifications#531.
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ComputationalWorkflow profile to FormalParameter BioSchemas/specifications#536.
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Review MassBank markup and add to LiveDeploys BioSchemas/specifications#198.
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22 issues received 32 new comments.
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additionalType still in use, its use is discouraged by Bioschemas (double check with @AlasdairGray ) BioSchemas/specifications#538 (7 comments by @AlasdairGray, @albangaignard, @marco-brandizi)
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ComputationalTool 0.5-DRAFT uses properties outside of schema.org BioSchemas/specifications#466 (3 comments by @alaninmcr, @AlasdairGray, @albangaignard)
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creator profile has it can have MANY, and an example of that is welcome BioSchemas/specifications#535 (2 comments by @egonw)
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Ontology vocabulary for featurelist property (Tools) BioSchemas/specifications#123 (1 comment by @albangaignard)
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Tool Citation should only be CreativeWork BioSchemas/specifications#159 (1 comment by @albangaignard)
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Revision bioschemas/Tools vs spreadsheet 0.5 DRAFT BioSchemas/specifications#454 (1 comment by @albangaignard)
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Is MediaObject the appropriate type for the input and output of a ComputationalTool? BioSchemas/specifications#465 (1 comment by @albangaignard)
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ToDos remaining in ComputationalTool 0.5-DRAFT BioSchemas/specifications#467 (1 comment by @albangaignard)
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How to make the distinction between multiple input / output parameters sharing the same "type" (EDAM data class) ? BioSchemas/specifications#471 (1 comment by @albangaignard)
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Agree properties for capturing input and output BioSchemas/specifications#526 (1 comment by @albangaignard)
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ELIXIR-PT example training URL no longer resolves BioSchemas/specifications#525 (1 comment by @AlasdairGray)
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ComputationalWorkflow profile to FormalParameter BioSchemas/specifications#536 (1 comment by @alaninmcr)
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BioSchemas/bioschemas.github.io
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10 pull requests opened.
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Update next community call date BioSchemas/bioschemas.github.io#466, by @AlasdairGray.
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Add links to meetings and publications BioSchemas/bioschemas.github.io#465, by @AlasdairGray.
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Remove ELIXIR-PT from Live Deploys list BioSchemas/bioschemas.github.io#464, by @AlasdairGray.
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New look for the tables + making them responsive BioSchemas/bioschemas.github.io#463, by @bedroesb.
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Adding a tag icon to the tags BioSchemas/bioschemas.github.io#462, by @bedroesb.
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Website rebuild news BioSchemas/bioschemas.github.io#461, by @AlasdairGray.
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Add Bioversions to live_deployment.json BioSchemas/bioschemas.github.io#460, by @cthoyt.
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Fix https://github.com/BioSchemas/specifications/issues/536 BioSchemas/bioschemas.github.io#459, by @AlasdairGray.
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Add ChEMBL Data Catalog to live deploys BioSchemas/bioschemas.github.io#458, by @AlasdairGray.
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Add BioHackathon 2021 to list of events BioSchemas/bioschemas.github.io#457, by @AlasdairGray.
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11 pull requests merged.
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Update next community call date BioSchemas/bioschemas.github.io#466.
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Created profile for Carl Boettiger BioSchemas/bioschemas.github.io#255.
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New look for the tables + making them responsive BioSchemas/bioschemas.github.io#463.
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Add Bioversions to live_deployment.json BioSchemas/bioschemas.github.io#460.
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Adding a tag icon to the tags BioSchemas/bioschemas.github.io#462.
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Website rebuild news BioSchemas/bioschemas.github.io#461.
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Moving to Bootstrap 5 + other improvements BioSchemas/bioschemas.github.io#446.
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Fix https://github.com/BioSchemas/specifications/issues/536 BioSchemas/bioschemas.github.io#459.
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Add BioHackathon 2021 to list of events BioSchemas/bioschemas.github.io#457.
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Add InterPro to list of live deploys BioSchemas/bioschemas.github.io#426.
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Add FAIRsharing sitemap BioSchemas/bioschemas.github.io#419.
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1 pull request closed.
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Added GA4GH use cases BioSchemas/bioschemas.github.io#196.
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1 pull request reopened.
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Created profile for Carl Boettiger BioSchemas/bioschemas.github.io#255, by @AlasdairGray.
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7 pull requests received 53 new comments.
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Moving to Bootstrap 5 + other improvements BioSchemas/bioschemas.github.io#446 (40 comments by @alaninmcr, @AlasdairGray, @bedroesb, @ljgarcia)
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Add Bioversions to live_deployment.json BioSchemas/bioschemas.github.io#460 (6 comments by @AlasdairGray, @cthoyt, @egonw)
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Created profile for Carl Boettiger BioSchemas/bioschemas.github.io#255 (2 comments by @AlasdairGray, @cboettig)
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New look for the tables + making them responsive BioSchemas/bioschemas.github.io#463 (1 comment by @bedroesb)
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Fix https://github.com/BioSchemas/specifications/issues/536 BioSchemas/bioschemas.github.io#459 (1 comment by @AlasdairGray)
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Add more detail to adding markup tutorial BioSchemas/bioschemas.github.io#447 (1 comment by @bedroesb)
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GitHub
BioSchemas/bioschemas.github.io
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12 pull requests opened.
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Fix broken previous link in ComputationalTools BioSchemas/bioschemas.github.io#456, by @AlasdairGray.
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Add news items to the website BioSchemas/bioschemas.github.io#455, by @AlasdairGray.
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Fix typos BioSchemas/bioschemas.github.io#454, by @AlasdairGray.
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Remove call link from website BioSchemas/bioschemas.github.io#453, by @AlasdairGray.
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Fixing figures that do not scale BioSchemas/bioschemas.github.io#452, by @bedroesb.
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Fixing mobile + link fix BioSchemas/bioschemas.github.io#451, by @bedroesb.
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Fixing mobile + link fix BioSchemas/bioschemas.github.io#450, by @bedroesb.
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Tutorial restyling BioSchemas/bioschemas.github.io#449, by @bedroesb.
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Update next call date and meeting link BioSchemas/bioschemas.github.io#448, by @AlasdairGray.
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Add more detail to adding markup tutorial BioSchemas/bioschemas.github.io#447, by @ljgarcia.
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Moving to Bootstrap 5 + other improvements BioSchemas/bioschemas.github.io#446, by @bedroesb.
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Back to top BioSchemas/bioschemas.github.io#445, by @bedroesb.
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11 pull requests merged.
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Add news items to the website BioSchemas/bioschemas.github.io#455.
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Fix broken previous link in ComputationalTools BioSchemas/bioschemas.github.io#456.
-
Fix typos BioSchemas/bioschemas.github.io#454.
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Remove call link from website BioSchemas/bioschemas.github.io#453.
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Fixing figures that do not scale BioSchemas/bioschemas.github.io#452.
-
Update next call date and meeting link BioSchemas/bioschemas.github.io#448.
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Fixing mobile + link fix BioSchemas/bioschemas.github.io#450.
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Tutorial restyling BioSchemas/bioschemas.github.io#449.
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Back to top BioSchemas/bioschemas.github.io#445.
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Improvements to the tutorial layout BioSchemas/bioschemas.github.io#442.
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Changed to relevant example BioSchemas/bioschemas.github.io#444.
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2 pull requests closed.
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Fixing mobile + link fix BioSchemas/bioschemas.github.io#451.
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No css reset BioSchemas/bioschemas.github.io#443.
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7 pull requests received 27 new comments.
-
Fixing mobile + link fix BioSchemas/bioschemas.github.io#450 (12 comments by @AlasdairGray, @bedroesb, @ljgarcia)
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Moving to Bootstrap 5 + other improvements BioSchemas/bioschemas.github.io#446 (2 comments by @AlasdairGray, @bedroesb)
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BioSchemas/specifications
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5 issues opened.
-
Image overlaps TOC and metadata boxes BioSchemas/specifications#533, by @ljgarcia.
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Issues on mobile devices BioSchemas/specifications#532, by @ljgarcia.
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Click/Link issue BioSchemas/specifications#531, by @ljgarcia.
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Dataset has no date fields (minimal nor recommended) BioSchemas/specifications#530, by @alaninmcr.
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DataCatalog description talks about Dataset BioSchemas/specifications#529, by @alaninmcr.
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4 issues closed.
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Image overlaps TOC and metadata boxes BioSchemas/specifications#533.
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Issues on mobile devices BioSchemas/specifications#532.
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Refine styling of tutorial layout BioSchemas/specifications#487.
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Dataset has no date fields (minimal nor recommended) BioSchemas/specifications#530.
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7 issues received 19 new comments.
-
Refine styling of tutorial layout BioSchemas/specifications#487 (4 comments by @AlasdairGray, @ljgarcia)
GitHub
BioSchemas/specifications
-
6 issues opened.
-
Using relative links on the website BioSchemas/specifications#528, by @bedroesb.
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Mobile device display issues BioSchemas/specifications#527, by @AlasdairGray.
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Agree properties for capturing input and output BioSchemas/specifications#526, by @AlasdairGray.
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ELIXIR-PT example training URL no longer resolves BioSchemas/specifications#525, by @AlasdairGray.
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Deployment of deprecated specifications BioSchemas/specifications#524, by @ljgarcia.
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Schema.org markup examples tutorial author information BioSchemas/specifications#522, by @AlasdairGray.
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12 issues received 25 new comments.
-
Create SequenceAnnotation profile BioSchemas/specifications#468 (5 comments by @AlasdairGray, @ljgarcia)
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Refine styling of tutorial layout BioSchemas/specifications#487 (3 comments by @AlasdairGray, @ljgarcia)
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ELIXIR-PT example training URL no longer resolves BioSchemas/specifications#525 (3 comments by @03c, @AlasdairGray)
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Deployment of deprecated specifications BioSchemas/specifications#524 (2 comments by @AlasdairGray, @ljgarcia)
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Add Rich Snippets to checking deployed markup tutorial BioSchemas/specifications#480 (2 comments by @AlasdairGray, @ljgarcia)
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Missing cardinality value for MolecularEntity properties BioSchemas/specifications#491 (1 comment by @AlasdairGray)
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Schema.org markup examples tutorial author information BioSchemas/specifications#522 (1 comment by @ljgarcia)
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Add clarification note to gender property in BioSample profile BioSchemas/specifications#515 (1 comment by @JonnyJD)
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1 pull request opened.
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tool profile example BioSchemas/specifications#523, by @albangaignard.
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1 pull request merged.
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tool profile example BioSchemas/specifications#523.
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1 pull request received 5 new comments.
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tool profile example BioSchemas/specifications#523 (5 comments by @alaninmcr, @AlasdairGray, @albangaignard, @ljgarcia)
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BioSchemas/bioschemas.github.io
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11 pull requests opened.
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Changed to relevant example BioSchemas/bioschemas.github.io#444, by @alaninmcr.
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No css reset BioSchemas/bioschemas.github.io#443, by @bedroesb.
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Improvements to the tutorial layout BioSchemas/bioschemas.github.io#442, by @bedroesb.
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Add audience groups and reorganize accordingly BioSchemas/bioschemas.github.io#441, by @ljgarcia.
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Readme Improvements BioSchemas/bioschemas.github.io#440, by @AlasdairGray.
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Add meeting agenda document link BioSchemas/bioschemas.github.io#439, by @AlasdairGray.
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0.6-DRAFT for ComputationalTool profile BioSchemas/bioschemas.github.io#438, by @albangaignard.
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Update live_deployments.json BioSchemas/bioschemas.github.io#437, by @alaninmcr.
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Ensembl have Gene and DataRecord deployments BioSchemas/bioschemas.github.io#436, by @AlasdairGray.
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Splash news about inclusion in schema.org BioSchemas/bioschemas.github.io#435, by @AlasdairGray.
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Update next call date BioSchemas/bioschemas.github.io#434, by @AlasdairGray.
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9 pull requests merged.
-
Add audience groups and reorganize accordingly BioSchemas/bioschemas.github.io#441.
-
Readme Improvements BioSchemas/bioschemas.github.io#440.
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0.6-DRAFT for ComputationalTool profile BioSchemas/bioschemas.github.io#438.
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Update next call date BioSchemas/bioschemas.github.io#434.
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Ensembl have Gene and DataRecord deployments BioSchemas/bioschemas.github.io#436.
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Add meeting agenda document link BioSchemas/bioschemas.github.io#439.
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Update live_deployments.json BioSchemas/bioschemas.github.io#437.
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Splash news about inclusion in schema.org BioSchemas/bioschemas.github.io#435.
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Address first and second tasks on 487 issue BioSchemas/bioschemas.github.io#433.
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1 pull request closed.
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Created Gemfile for configuring test instance BioSchemas/bioschemas.github.io#135.
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1 pull request reopened.
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Created Gemfile for configuring test instance BioSchemas/bioschemas.github.io#135, by @AlasdairGray.
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4 pull requests received 7 new comments.
-
Created Gemfile for configuring test instance BioSchemas/bioschemas.github.io#135 (4 comments by @AlasdairGray, @albangaignard)
-
0.6-DRAFT for ComputationalTool profile BioSchemas/bioschemas.github.io#438 (1 comment by @ljgarcia)
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Splash news about inclusion in schema.org BioSchemas/bioschemas.github.io#435 (1 comment by @AlasdairGray)
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GitHub
BioSchemas/specifications
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19 issues opened.
-
Add property to BioSample to capture details of the Donor BioSchemas/specifications#521, by @AlasdairGray.
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Add property to BioSample profile to capture the reprogramming method BioSchemas/specifications#520, by @AlasdairGray.
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Add property to BioSample profile to capture whether the gene has been edited BioSchemas/specifications#519, by @AlasdairGray.
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Add a property to BioSample to capture the source cell type BioSchemas/specifications#518, by @AlasdairGray.
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Add a property to BioSample to capture the Pluripotent Stem Cell Type BioSchemas/specifications#517, by @AlasdairGray.
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BioSample may need to capture a range of ages BioSchemas/specifications#516, by @AlasdairGray.
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Add clarification note to gender property in BioSample profile BioSchemas/specifications#515, by @AlasdairGray.
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Revise How to add markup tutorial BioSchemas/specifications#514, by @AlasdairGray.
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Recent News Feed BioSchemas/specifications#513, by @AlasdairGray.
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hasStatus of the Gene profile should be clarified BioSchemas/specifications#512, by @albangaignard.
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Approve Change to Governance Document for Versioning BioSchemas/specifications#511, by @AlasdairGray.
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Remove date element to version numbers BioSchemas/specifications#510, by @AlasdairGray.
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Update versioning process BioSchemas/specifications#509, by @AlasdairGray.
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Validating Markup for Live Deploy Page BioSchemas/specifications#508, by @AlasdairGray.
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Update Markup Example Tutorial BioSchemas/specifications#507, by @AlasdairGray.
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New approach for developing type proposals BioSchemas/specifications#506, by @AlasdairGray.
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Live deploys per node tab BioSchemas/specifications#505, by @ljgarcia.
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Medical code BioSchemas/specifications#504, by @ljgarcia.
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Tidy up CSS BioSchemas/specifications#503, by @AlasdairGray.
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8 issues closed.
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Improve website documentation for updating profiles BioSchemas/specifications#325.
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Review/comments of Workflow specifications BioSchemas/specifications#456.
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Protein 0.11 links to 404 DNA and RNA BioSchemas/specifications#500.
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Create tutorial on GSheet BioSchemas/specifications#489.
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Create tutorial on how to create a new draft for an existing profile BioSchemas/specifications#490.
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DataRecord BioSchemas/specifications#450.
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Add F+ Data Catalog to live deploy page BioSchemas/specifications#499.
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Replace SDTT with Schema.org Validator on live deploys page BioSchemas/specifications#498.
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24 issues received 49 new comments.
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Create SequenceAnnotation profile BioSchemas/specifications#468 (13 comments by @AlasdairGray, @ivanmicetic, @ljgarcia)
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Markup should state its conformance BioSchemas/specifications#297 (6 comments by @AlasdairGray, @stain)
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Add Rich Snippets to checking deployed markup tutorial BioSchemas/specifications#480 (2 comments by @AlasdairGray, @ljgarcia)
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Recommend usage of @type and @id BioSchemas/specifications#294 (2 comments by @AlasdairGray, @ljgarcia)
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Refine styling of tutorial layout BioSchemas/specifications#487 (2 comments by @AlasdairGray, @ljgarcia)
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New approach for developing type proposals BioSchemas/specifications#506 (2 comments by @AlasdairGray)
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Recommend property to connect markup to profile to which it conforms BioSchemas/specifications#481 (2 comments by @AlasdairGray, @stain)
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Add property to BioSample profile to capture whether the gene has been edited BioSchemas/specifications#519 (1 comment by @AlasdairGray)
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hasStatus of the Gene profile should be clarified BioSchemas/specifications#512 (1 comment by @AlasdairGray)
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Improve website documentation for updating profiles BioSchemas/specifications#325 (1 comment by @AlasdairGray)
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Create tutorial on how to create a new draft for an existing profile BioSchemas/specifications#490 (1 comment by @AlasdairGray)
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Replace SDTT with Schema.org Validator on live deploys page BioSchemas/specifications#498 (1 comment by @AlasdairGray)
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BioSchemas/bioschemas.github.io
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20 pull requests opened.
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Address first and second tasks on 487 issue BioSchemas/bioschemas.github.io#433, by @ljgarcia.
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List ebisc on the Live Deploys page BioSchemas/bioschemas.github.io#432, by @AlasdairGray.
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Add BMRB to live deploy list BioSchemas/bioschemas.github.io#431, by @AlasdairGray.
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Fix Missing Redirects for DNA and RNA types BioSchemas/bioschemas.github.io#430, by @AlasdairGray.
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Fix broken links to related communities page BioSchemas/bioschemas.github.io#429, by @AlasdairGray.
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Validator Meeting BioSchemas/bioschemas.github.io#428, by @AlasdairGray.
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Added a DataCatalogue for NanoCommons BioSchemas/bioschemas.github.io#427, by @egonw.
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Add InterPro to list of live deploys BioSchemas/bioschemas.github.io#426, by @AlasdairGray.
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Add summary of outcomes of helpdesk session BioSchemas/bioschemas.github.io#425, by @AlasdairGray.
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Add Orphanet to the list of live deploys BioSchemas/bioschemas.github.io#424, by @AlasdairGray.
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Add Marco's github BioSchemas/bioschemas.github.io#423, by @AlasdairGray.
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Fix typo Bioscheams BioSchemas/bioschemas.github.io#422, by @ljgarcia.
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Diseases Group and Disease Profile v0.1-DRAFT BioSchemas/bioschemas.github.io#421, by @AlasdairGray.
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Slide links for Data Management workshop at ELIXIR All Hands Meeting BioSchemas/bioschemas.github.io#420, by @AlasdairGray.
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Add FAIRsharing sitemap BioSchemas/bioschemas.github.io#419, by @AlasdairGray.
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Fix URL used by Schema.org validator BioSchemas/bioschemas.github.io#418, by @AlasdairGray.
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TOC style changes BioSchemas/bioschemas.github.io#417, by @bedroesb.
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Add deployments from the Plant Community BioSchemas/bioschemas.github.io#416, by @AlasdairGray.
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Add IMI Data Catalog to live deploys BioSchemas/bioschemas.github.io#415, by @AlasdairGray.
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Replace Google's SDTT with Schema.org Markup Validator on Live Deploy page BioSchemas/bioschemas.github.io#414, by @AlasdairGray.
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20 pull requests merged.
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List ebisc on the Live Deploys page BioSchemas/bioschemas.github.io#432.
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Fix Missing Redirects for DNA and RNA types BioSchemas/bioschemas.github.io#430.
-
Add BMRB to live deploy list BioSchemas/bioschemas.github.io#431.
-
Fix broken links to related communities page BioSchemas/bioschemas.github.io#429.
-
TOC style changes BioSchemas/bioschemas.github.io#417.
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Validator Meeting BioSchemas/bioschemas.github.io#428.
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Added a DataCatalogue for NanoCommons BioSchemas/bioschemas.github.io#427.
-
Slide links for Data Management workshop at ELIXIR All Hands Meeting BioSchemas/bioschemas.github.io#420.
-
Add Orphanet to the list of live deploys BioSchemas/bioschemas.github.io#424.
-
Add summary of outcomes of helpdesk session BioSchemas/bioschemas.github.io#425.
-
Add Marco's github BioSchemas/bioschemas.github.io#423.
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Add deployments from the Plant Community BioSchemas/bioschemas.github.io#416.
-
Fix typo Bioscheams BioSchemas/bioschemas.github.io#422.
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Fix URL used by Schema.org validator BioSchemas/bioschemas.github.io#418.
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Diseases Group and Disease Profile v0.1-DRAFT BioSchemas/bioschemas.github.io#421.
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Add new tutorial on how to create draft profile BioSchemas/bioschemas.github.io#395.
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Replace Google's SDTT with Schema.org Markup Validator on Live Deploy page BioSchemas/bioschemas.github.io#414.
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Add IMI Data Catalog to live deploys BioSchemas/bioschemas.github.io#415.
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First try in making a table of contents BioSchemas/bioschemas.github.io#411.
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First draft of creating a new profile tutorial BioSchemas/bioschemas.github.io#413.
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1 pull request closed.
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added eNanoMapper Dataset deployment BioSchemas/bioschemas.github.io#275.
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8 pull requests received 35 new comments.
-
Add new tutorial on how to create draft profile BioSchemas/bioschemas.github.io#395 (12 comments by @AlasdairGray, @ljgarcia)
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Add deployments from the Plant Community BioSchemas/bioschemas.github.io#416 (5 comments by @AlasdairGray, @bedroesb, @DanFaria)
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Add InterPro to list of live deploys BioSchemas/bioschemas.github.io#426 (4 comments by @AlasdairGray, @aurel-l, @Swaathik)
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First try in making a table of contents BioSchemas/bioschemas.github.io#411 (4 comments by @AlasdairGray, @bedroesb, @ljgarcia)
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Slide links for Data Management workshop at ELIXIR All Hands Meeting BioSchemas/bioschemas.github.io#420 (2 comments by @AlasdairGray, @albangaignard)
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First draft of creating a new profile tutorial BioSchemas/bioschemas.github.io#413 (2 comments by @AlasdairGray, @ljgarcia)
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added eNanoMapper Dataset deployment BioSchemas/bioschemas.github.io#275 (1 comment by @AlasdairGray)
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Participants
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1 participant joined.
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Satya Sahoo joined.
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1 participant left.
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olga giraldo (Universidad Politécnica de Madrid) left.
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GitHub
BioSchemas/bioschemas.github.io
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13 pull requests opened.
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First draft of creating a new profile tutorial BioSchemas/bioschemas.github.io#413, by @AlasdairGray.
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Remove old live deploy data file BioSchemas/bioschemas.github.io#412, by @AlasdairGray.
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First try in making a table of contents BioSchemas/bioschemas.github.io#411, by @bedroesb.
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Update community call date BioSchemas/bioschemas.github.io#410, by @AlasdairGray.
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Add Stian to tools group BioSchemas/bioschemas.github.io#409, by @AlasdairGray.
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Updated the live deploy info for NanoCommons use of BioSchemas BioSchemas/bioschemas.github.io#408, by @egonw.
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Updated deployment info for WikiPathways BioSchemas/bioschemas.github.io#407, by @egonw.
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spellchecking BioSchemas/bioschemas.github.io#406, by @CaroleGoble.
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ProteinAnnotation profile versions BioSchemas/bioschemas.github.io#405, by @AlasdairGray.
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Fixed image URL BioSchemas/bioschemas.github.io#404, by @AlasdairGray.
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Update Live Deploy page to use data in JSON format BioSchemas/bioschemas.github.io#403, by @AlasdairGray.
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Update howto_right_profile.md BioSchemas/bioschemas.github.io#402, by @frmichel.
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Now conform 0.4-DRAFT BioSchemas/bioschemas.github.io#401, by @egonw.
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13 pull requests merged.
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Remove old live deploy data file BioSchemas/bioschemas.github.io#412.
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Update Live Deploy page to use data in JSON format BioSchemas/bioschemas.github.io#403.
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Update community call date BioSchemas/bioschemas.github.io#410.
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Add 08 release for Gene BioSchemas/bioschemas.github.io#388.
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Fixed image URL BioSchemas/bioschemas.github.io#404.
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ProteinAnnotation profile versions BioSchemas/bioschemas.github.io#405.
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spellchecking BioSchemas/bioschemas.github.io#406.
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Updated deployment info for WikiPathways BioSchemas/bioschemas.github.io#407.
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Updated the live deploy info for NanoCommons use of BioSchemas BioSchemas/bioschemas.github.io#408.
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Add Stian to tools group BioSchemas/bioschemas.github.io#409.
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Added mention of ELIXIR scientific programme BioSchemas/bioschemas.github.io#342.
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Update howto_right_profile.md BioSchemas/bioschemas.github.io#402.
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Now conform 0.4-DRAFT BioSchemas/bioschemas.github.io#401.
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1 pull request closed.
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BEACONS ONLY attempt at new people pages BioSchemas/bioschemas.github.io#234.
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11 pull requests received 53 new comments.
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Add new tutorial on how to create draft profile BioSchemas/bioschemas.github.io#395 (31 comments by @AlasdairGray, @ljgarcia)
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Update Live Deploy page to use data in JSON format BioSchemas/bioschemas.github.io#403 (6 comments by @AlasdairGray, @albangaignard, @egonw)
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Created Gemfile for configuring test instance BioSchemas/bioschemas.github.io#135 (4 comments by @AlasdairGray, @ljgarcia)
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Added mention of ELIXIR scientific programme BioSchemas/bioschemas.github.io#342 (3 comments by @AlasdairGray, @nsjuty)
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BEACONS ONLY attempt at new people pages BioSchemas/bioschemas.github.io#234 (2 comments by @AlasdairGray, @ljgarcia)
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First draft of creating a new profile tutorial BioSchemas/bioschemas.github.io#413 (1 comment by @ljgarcia)
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First try in making a table of contents BioSchemas/bioschemas.github.io#411 (1 comment by @bedroesb)
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BioSchemas/specifications
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5 issues opened.
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encodesBioChemEntity should be added to BioSample profile BioSchemas/specifications#502, by @AlasdairGray.
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Cardinality contradiction on keywords property on Dataset 0.4-DRAFT BioSchemas/specifications#501, by @AlasdairGray.
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Protein 0.11 links to 404 DNA and RNA BioSchemas/specifications#500, by @egonw.
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Add F+ Data Catalog to live deploy page BioSchemas/specifications#499, by @AlasdairGray.
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Replace SDTT with Schema.org Validator on live deploys page BioSchemas/specifications#498, by @AlasdairGray.
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3 issues closed.
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Denied access to spreadsheets for various profiles BioSchemas/specifications#445.
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Missing cardinality value for properties in Gene profile BioSchemas/specifications#492.
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Table row expansion does not work if 'name' contains a `.` BioSchemas/specifications#496.
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8 issues received 15 new comments.
-
Refine styling of tutorial layout BioSchemas/specifications#487 (5 comments by @AlasdairGray, @bedroesb, @ljgarcia)
-
Missing cardinality value for MolecularEntity properties BioSchemas/specifications#491 (3 comments by @AlasdairGray, @egonw)
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Denied access to spreadsheets for various profiles BioSchemas/specifications#445 (1 comment by @AlasdairGray)
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Missing cardinality value for properties in Gene profile BioSchemas/specifications#492 (1 comment by @AlasdairGray)
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Table row expansion does not work if 'name' contains a `.` BioSchemas/specifications#496 (1 comment by @AlasdairGray)
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1 pull request merged.
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Taxon examples refactoring BioSchemas/specifications#497.
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GitHub
BioSchemas/bioschemas.github.io
-
14 pull requests opened.
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Update call date BioSchemas/bioschemas.github.io#400, by @AlasdairGray.
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BridgeDb Data now conform Dataset 0.4-DRAFT BioSchemas/bioschemas.github.io#399, by @egonw.
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Update FranckMichel.md BioSchemas/bioschemas.github.io#398, by @frmichel.
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Update what_why_bioschemas.md BioSchemas/bioschemas.github.io#397, by @nsjuty.
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Minor corrections to text of Schema.org What and Why tutorial BioSchemas/bioschemas.github.io#396, by @AlasdairGray.
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Add new tutorial on how to create draft profile BioSchemas/bioschemas.github.io#395, by @ljgarcia.
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Add E-UK hackathon BioSchemas/bioschemas.github.io#394, by @AlasdairGray.
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Add Google Rich Results Test example BioSchemas/bioschemas.github.io#393, by @ivanmicetic.
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Add Google Rich Results Test BioSchemas/bioschemas.github.io#392, by @ivanmicetic.
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Remove empty section BioSchemas/bioschemas.github.io#391, by @AlasdairGray.
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Update BMUSE service URL BioSchemas/bioschemas.github.io#390, by @AlasdairGray.
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Attempt to fix Issues 494 BioSchemas/bioschemas.github.io#389, by @AlasdairGray.
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Add 08 release for Gene BioSchemas/bioschemas.github.io#388, by @ljgarcia.
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Fix biogicalRole typo on some of the released types BioSchemas/bioschemas.github.io#387, by @AlasdairGray.
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15 pull requests merged.
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Update call date BioSchemas/bioschemas.github.io#400.
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Add Google Rich Results Test BioSchemas/bioschemas.github.io#392.
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Minor corrections to text of Schema.org What and Why tutorial BioSchemas/bioschemas.github.io#396.
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Update what_why_bioschemas.md BioSchemas/bioschemas.github.io#397.
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Update FranckMichel.md BioSchemas/bioschemas.github.io#398.
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BridgeDb Data now conform Dataset 0.4-DRAFT BioSchemas/bioschemas.github.io#399.
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Add Google Rich Results Test example BioSchemas/bioschemas.github.io#393.
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List Bioschemas Training Portal in live deploys BioSchemas/bioschemas.github.io#381.
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Update BMUSE service URL BioSchemas/bioschemas.github.io#390.
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Remove empty section BioSchemas/bioschemas.github.io#391.
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Attempt to fix Issues 494 BioSchemas/bioschemas.github.io#389.
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Add E-UK hackathon BioSchemas/bioschemas.github.io#394.
-
Fix biogicalRole typo on some of the released types BioSchemas/bioschemas.github.io#387.
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Move tutorials to the Bioschemas website BioSchemas/bioschemas.github.io#380.
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Prepared 0.4-DRAFT of Dataset Profile BioSchemas/bioschemas.github.io#386.
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6 pull requests received 20 new comments.
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Move tutorials to the Bioschemas website BioSchemas/bioschemas.github.io#380 (11 comments by @AlasdairGray, @albangaignard)
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Add new tutorial on how to create draft profile BioSchemas/bioschemas.github.io#395 (4 comments by @albangaignard, @ljgarcia)
-
Add Google Rich Results Test BioSchemas/bioschemas.github.io#392 (2 comments by @AlasdairGray, @ljgarcia)
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BridgeDb Data now conform Dataset 0.4-DRAFT BioSchemas/bioschemas.github.io#399 (1 comment by @AlasdairGray)
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List Bioschemas Training Portal in live deploys BioSchemas/bioschemas.github.io#381 (1 comment by @AlasdairGray)
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BioSchemas/specifications
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4 issues opened.
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Table row expansion does not work if 'name' contains a `.` BioSchemas/specifications#496, by @AlasdairGray.
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Change BMUSE deployment URL on Check Markup tutorial BioSchemas/specifications#495, by @AlasdairGray.
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Drop down menu links go to 404 BioSchemas/specifications#494, by @AlasdairGray.
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As a dataset user I want to ensure the identify of my dataset with a SHA calculation in my metadata. BioSchemas/specifications#493, by @mjy.
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3 issues closed.
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Drop down menu links go to 404 BioSchemas/specifications#494.
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Change BMUSE deployment URL on Check Markup tutorial BioSchemas/specifications#495.
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biogicalRole typo instead of biologicalRole BioSchemas/specifications#484.
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6 issues received 16 new comments.
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Missing cardinality value for properties in Gene profile BioSchemas/specifications#492 (9 comments by @alaninmcr, @AlasdairGray, @ljgarcia, @micheldumontier)
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Update and refresh existing tutorials BioSchemas/specifications#488 (2 comments by @ljgarcia, @nsjuty)
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As a dataset user I want to ensure the identify of my dataset with a SHA calculation in my metadata. BioSchemas/specifications#493 (2 comments by @alaninmcr, @stain)
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Table row expansion does not work if 'name' contains a `.` BioSchemas/specifications#496 (1 comment by @AlasdairGray)
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biogicalRole typo instead of biologicalRole BioSchemas/specifications#484 (1 comment by @AlasdairGray)
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1 pull request opened.
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Taxon examples refactoring BioSchemas/specifications#497, by @frmichel.
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GitHub
BioSchemas/specifications
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9 issues opened.
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Missing cardinality value for properties in Gene profile BioSchemas/specifications#492, by @GloC99.
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Missing cardinality value for MolecularEntity properties BioSchemas/specifications#491, by @GloC99.
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Create tutorial on how to create a new draft for an existing profile BioSchemas/specifications#490, by @ljgarcia.
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Create tutorial on GSheet BioSchemas/specifications#489, by @ljgarcia.
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Update and refresh existing tutorials BioSchemas/specifications#488, by @AlasdairGray.
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Refine styling of tutorial layout BioSchemas/specifications#487, by @AlasdairGray.
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RNA does not appear to be covered by any existing group BioSchemas/specifications#486, by @ljgarcia.
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Missing use cases BioSchemas/specifications#485, by @ljgarcia.
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biogicalRole typo instead of biologicalRole BioSchemas/specifications#484, by @AlasdairGray.
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18 issues closed.
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Identify common fields in training materials BioSchemas/specifications#32.
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Update Dataset profile to Schema.org 10.0 BioSchemas/specifications#473.
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Link Dataset to Study: proposal to use `isBasedOn` BioSchemas/specifications#477.
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Dataset updates BioSchemas/specifications#312.
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Keywords uses array [Dataset] BioSchemas/specifications#311.
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Identifier clarity [Dataset] BioSchemas/specifications#310.
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Add links to BioSchemas presentations BioSchemas/specifications#48.
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Review the examples for the event spec BioSchemas/specifications#29.
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Add group forums (mailing lists) link in the group pages BioSchemas/specifications#55.
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Add a link to the group pages in the github team pages BioSchemas/specifications#34.
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Review Standard Specifications Process Document BioSchemas/specifications#26.
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SemanticAnnotation: ScholarlyPublication or ScholarlyArticle BioSchemas/specifications#322.
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Develop tutorial layout and include Bioschemas markup BioSchemas/specifications#479.
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Deprecated types BioSchemas/specifications#483.
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Challenges of consuming with DataRecord, do we need it? BioSchemas/specifications#475.
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Missing use cases BioSchemas/specifications#485.
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Missing use cases for ChemicalSubstance BioSchemas/specifications#257.
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Missing use cases for MolecularEntity BioSchemas/specifications#256.
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20 issues received 33 new comments.
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Develop tutorial layout and include Bioschemas markup BioSchemas/specifications#479 (4 comments by @AlasdairGray, @ljgarcia)
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biogicalRole typo instead of biologicalRole BioSchemas/specifications#484 (2 comments by @AlasdairGray)
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RNA does not appear to be covered by any existing group BioSchemas/specifications#486 (2 comments by @AlasdairGray, @ljgarcia)
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BioSchemas/specifications#32 (1 comment by @AlasdairGray)
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Link Dataset to Study: proposal to use `isBasedOn` BioSchemas/specifications#477 (1 comment by @AlasdairGray)
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Update Dataset profile to Schema.org 10.0 BioSchemas/specifications#473 (1 comment by @AlasdairGray)
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BioSchemas/specifications#48 (1 comment by @AlasdairGray)
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BioSchemas/specifications#29 (1 comment by @AlasdairGray)
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BioSchemas/specifications#55 (1 comment by @AlasdairGray)
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BioSchemas/specifications#34 (1 comment by @AlasdairGray)
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BioSchemas/specifications#26 (1 comment by @AlasdairGray)
BioSchemas/bioschemas.github.io
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10 pull requests opened.
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Prepared 0.4-DRAFT of Dataset Profile BioSchemas/bioschemas.github.io#386, by @AlasdairGray.
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Add details of ELIXIR All Hands Meeting BioSchemas/bioschemas.github.io#385, by @AlasdairGray.
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Biodiversity Webinar slides and video BioSchemas/bioschemas.github.io#384, by @AlasdairGray.
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Update for April Community Call date BioSchemas/bioschemas.github.io#383, by @AlasdairGray.
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Correct release date on ComputationalWorkflow and FormalParameter BioSchemas/bioschemas.github.io#382, by @AlasdairGray.
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List Bioschemas Training Portal in live deploys BioSchemas/bioschemas.github.io#381, by @AlasdairGray.
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Move tutorials to the Bioschemas website BioSchemas/bioschemas.github.io#380, by @AlasdairGray.
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Add HGNC to live deploy list BioSchemas/bioschemas.github.io#379, by @AlasdairGray.
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Add GBIF TaxonName to the live deploy page BioSchemas/bioschemas.github.io#378, by @AlasdairGray.
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Add Chemistry use case BioSchemas/bioschemas.github.io#377, by @AlasdairGray.
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12 pull requests merged.
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Add details of ELIXIR All Hands Meeting BioSchemas/bioschemas.github.io#385.
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Biodiversity Webinar slides and video BioSchemas/bioschemas.github.io#384.
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Update for April Community Call date BioSchemas/bioschemas.github.io#383.
-
Correct release date on ComputationalWorkflow and FormalParameter BioSchemas/bioschemas.github.io#382.
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Add HGNC to live deploy list BioSchemas/bioschemas.github.io#379.
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Release 1.0 of ComputationalWorkflow and FormalParameter BioSchemas/bioschemas.github.io#335.
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Add GBIF TaxonName to the live deploy page BioSchemas/bioschemas.github.io#378.
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Add Chemistry use case BioSchemas/bioschemas.github.io#377.
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New Dutch resource BioSchemas/bioschemas.github.io#368.
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Use case template BioSchemas/bioschemas.github.io#376.
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Deprecate DataRecord BioSchemas/bioschemas.github.io#369.
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Add Biodiversity Meeting BioSchemas/bioschemas.github.io#371.
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5 pull requests received 31 new comments.
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Release 1.0 of ComputationalWorkflow and FormalParameter BioSchemas/bioschemas.github.io#335 (16 comments by @alaninmcr, @AlasdairGray, @ljgarcia)
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Correct release date on ComputationalWorkflow and FormalParameter BioSchemas/bioschemas.github.io#382 (5 comments by @alaninmcr, @AlasdairGray, @ljgarcia)
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Move tutorials to the Bioschemas website BioSchemas/bioschemas.github.io#380 (2 comments by @AlasdairGray, @ljgarcia)
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GitHub
BioSchemas/bioschemas.github.io
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14 pull requests opened.
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Use case template BioSchemas/bioschemas.github.io#376, by @AlasdairGray.
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Add Matus Kalas BioSchemas/bioschemas.github.io#375, by @AlasdairGray.
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Create ComputationalTool.html BioSchemas/bioschemas.github.io#374, by @alaninmcr.
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Fixed mistyped URL BioSchemas/bioschemas.github.io#373, by @matuskalas.
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Add GBIF to Taxon live deploys BioSchemas/bioschemas.github.io#372, by @thomasstjerne.
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Add Biodiversity Meeting BioSchemas/bioschemas.github.io#371, by @AlasdairGray.
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Update next meeting date BioSchemas/bioschemas.github.io#370, by @AlasdairGray.
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Deprecate DataRecord BioSchemas/bioschemas.github.io#369, by @AlasdairGray.
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New Dutch resource BioSchemas/bioschemas.github.io#368, by @egonw.
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Added WikiPathways which also has BioSchemas annotation now BioSchemas/bioschemas.github.io#367, by @egonw.
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Added a NanoCommons with openly licensed datasets. BioSchemas/bioschemas.github.io#366, by @egonw.
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Linkfix BioSchemas/bioschemas.github.io#365, by @alaninmcr.
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Added Quentin to biodiversity champions list BioSchemas/bioschemas.github.io#364, by @AlasdairGray.
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Tutorial on checking deployed markup BioSchemas/bioschemas.github.io#363, by @AlasdairGray.
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12 pull requests merged.
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Add Matus Kalas BioSchemas/bioschemas.github.io#375.
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Create ComputationalTool.html BioSchemas/bioschemas.github.io#374.
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Fixed mistyped URL BioSchemas/bioschemas.github.io#373.
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Add GBIF to Taxon live deploys BioSchemas/bioschemas.github.io#372.
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Update next meeting date BioSchemas/bioschemas.github.io#370.
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Tutorial on checking deployed markup BioSchemas/bioschemas.github.io#363.
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Linkfix BioSchemas/bioschemas.github.io#365.
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Added WikiPathways which also has BioSchemas annotation now BioSchemas/bioschemas.github.io#367.
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Added a NanoCommons with openly licensed datasets. BioSchemas/bioschemas.github.io#366.
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Show the latest release number on live deploys headers BioSchemas/bioschemas.github.io#362.
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Added STRING-db to live deploys of Proteins BioSchemas/bioschemas.github.io#247.
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Added Quentin to biodiversity champions list BioSchemas/bioschemas.github.io#364.
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7 pull requests received 24 new comments.
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New Dutch resource BioSchemas/bioschemas.github.io#368 (11 comments by @AlasdairGray, @egonw, @justinjjvanderhooft)
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Release 1.0 of ComputationalWorkflow and FormalParameter BioSchemas/bioschemas.github.io#335 (2 comments by @alaninmcr, @ljgarcia)
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Show the latest release number on live deploys headers BioSchemas/bioschemas.github.io#362 (1 comment by @AlasdairGray)
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Added STRING-db to live deploys of Proteins BioSchemas/bioschemas.github.io#247 (1 comment by @AlasdairGray)
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BioSchemas/specifications
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4 issues opened.
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Deprecated types BioSchemas/specifications#483, by @AlasdairGray.
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general review of 'Study' profile 0.2 BioSchemas/specifications#482, by @nsjuty.
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Recommend property to connect markup to profile to which it conforms BioSchemas/specifications#481, by @AlasdairGray.
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Add Rich Snippets to checking deployed markup tutorial BioSchemas/specifications#480, by @AlasdairGray.
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3 issues closed.
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Missing use cases for Tool BioSchemas/specifications#249.
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"offers" property in Tool specification should be clarified BioSchemas/specifications#124.
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Improvement of description on "potentialAction (object of a ControlAction)" in tools specification BioSchemas/specifications#126.
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10 issues received 19 new comments.
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Develop tutorial layout and include Bioschemas markup BioSchemas/specifications#479 (7 comments by @AlasdairGray, @ljgarcia)
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Review/comments of Workflow specifications BioSchemas/specifications#456 (3 comments by @alaninmcr, @ljgarcia)
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Improvement of description on "potentialAction (object of a ControlAction)" in tools specification BioSchemas/specifications#126 (2 comments by @albangaignard, @stain)
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"offers" property in Tool specification should be clarified BioSchemas/specifications#124 (1 comment by @albangaignard)
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Challenges of consuming with DataRecord, do we need it? BioSchemas/specifications#475 (1 comment by @AlasdairGray)
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Is MediaObject the appropriate type for the input and output of a ComputationalTool? BioSchemas/specifications#465 (1 comment by @hmenager)
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GitHub
BioSchemas/bioschemas.github.io
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11 pull requests opened.
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Show the latest release number on live deploys headers BioSchemas/bioschemas.github.io#362, by @AlasdairGray.
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Updated community call date BioSchemas/bioschemas.github.io#361, by @AlasdairGray.
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Add redirection link BioSchemas/bioschemas.github.io#360, by @AlasdairGray.
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Steering council update BioSchemas/bioschemas.github.io#359, by @AlasdairGray.
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Add link to webinar BioSchemas/bioschemas.github.io#357, by @AlasdairGray.
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Enable link to live deploys BioSchemas/bioschemas.github.io#356, by @AlasdairGray.
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Adding Sarala as a Champion BioSchemas/bioschemas.github.io#354, by @AlasdairGray.
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Update AlejandraGonzalez-Beltran.md BioSchemas/bioschemas.github.io#353, by @agbeltran.
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Adding Alban to Tools and Validation groups BioSchemas/bioschemas.github.io#352, by @AlasdairGray.
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12 pull requests merged.
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Adding Sarala as a Champion BioSchemas/bioschemas.github.io#354.
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Add redirection link BioSchemas/bioschemas.github.io#360.
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Steering council update BioSchemas/bioschemas.github.io#359.
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Updated community call date BioSchemas/bioschemas.github.io#361.
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Adding Alban to Tools and Validation groups BioSchemas/bioschemas.github.io#352.
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Tutorials BioSchemas/bioschemas.github.io#358.
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Add link to webinar BioSchemas/bioschemas.github.io#357.
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Enable link to live deploys BioSchemas/bioschemas.github.io#356.
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Typo fix. BioSchemas/bioschemas.github.io#355.
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Update AlejandraGonzalez-Beltran.md BioSchemas/bioschemas.github.io#353.
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Study 0.2 draft BioSchemas/bioschemas.github.io#350.
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Add Chris Child BioSchemas/bioschemas.github.io#351.
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2 pull requests received 8 new comments.
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Release 1.0 of ComputationalWorkflow and FormalParameter BioSchemas/bioschemas.github.io#335 (7 comments by @alaninmcr, @AlasdairGray)
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Update AlejandraGonzalez-Beltran.md BioSchemas/bioschemas.github.io#353 (1 comment by @AlasdairGray)
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BioSchemas/specifications
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1 issue opened.
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Develop tutorial layout and include Bioschemas markup BioSchemas/specifications#479, by @AlasdairGray.
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1 issue closed.
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Autogenerate tool markup from https://bio.tools/ BioSchemas/specifications#340.
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2 issues received 3 new comments.
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Challenges of consuming with DataRecord, do we need it? BioSchemas/specifications#475 (2 comments by @AlasdairGray, @keesvanbochove)
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Autogenerate tool markup from https://bio.tools/ BioSchemas/specifications#340 (1 comment by @albangaignard)
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